Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.45□□□□□ -1.22
CLIP2Q9UDT6 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.45□□□□□ -1.22
CLIP2Q9UDT6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CLIP2Q9UDT6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.45□□□□□ -1.22
CLIP2Q9UDT6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.45□□□□□ -1.22
CLIP2Q9UDT6 AL136984.1-201ENST00000607611 1893 ntBASIC7.45□□□□□ -1.22
CLIP2Q9UDT6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 SOCS5P1-201ENST00000440415 949 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AL133351.3-201ENST00000454998 193 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AP002884.1-201ENST00000479691 655 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AP002453.1-201ENST00000492327 668 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 PFN1P8-201ENST00000497012 543 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 KHDC1P1-201ENST00000511053 508 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 DYNLL1P1-201ENST00000595442 269 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC091167.5-201ENST00000605689 894 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 RN7SL261P-201ENST00000613441 282 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC068769.1-201ENST00000474767 2426 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 HSPD1P8-201ENST00000400121 1658 ntBASIC7.44□□□□□ -1.22
CLIP2Q9UDT6 AC104966.1-201ENST00000467010 1464 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 SNORA11.3-201ENST00000408471 128 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC110602.1-201ENST00000437414 318 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 OR4D12P-201ENST00000509361 911 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 IGKV1D-22-201ENST00000518953 324 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC009879.1-201ENST00000520029 839 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 SNORA11.6-201ENST00000619030 128 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AC005225.5-201ENST00000623547 2225 ntBASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CLIP2Q9UDT6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC011455.2-201ENST00000599320 3336 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 IMMTP1-201ENST00000435590 2219 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 RNA5SP433-201ENST00000364491 114 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 RNU6-316P-201ENST00000391027 107 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 RPS7P14-201ENST00000426405 583 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC097721.1-201ENST00000427150 1253 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC069154.1-201ENST00000432914 542 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 MRPS21P3-201ENST00000436696 262 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AMYP1-201ENST00000440059 1023 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 H3F3BP1-201ENST00000440551 403 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms