Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC112243.1-201ENST00000623949 3851 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 OR7E25P-201ENST00000344844 931 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 MRPS6P2-201ENST00000381143 370 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC073310.1-201ENST00000423226 1033 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 BMP6P1-201ENST00000431230 679 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC092106.2-201ENST00000436597 487 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 TVP23CP1-201ENST00000450317 639 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC099670.1-201ENST00000455141 783 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 EIF2S2P5-201ENST00000457635 968 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC018638.3-201ENST00000461273 132 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC093870.1-201ENST00000506837 213 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC026956.1-201ENST00000558741 396 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC004232.2-201ENST00000574245 821 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 MIR212-201ENST00000586026 110 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 BNIP3P40-201ENST00000596017 556 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC068726.1-201ENST00000610993 341 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 GAPDHP41-201ENST00000613707 975 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL512506.1-201ENST00000613918 449 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC090772.4-201ENST00000623599 362 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AC007993.1-201ENST00000621298 2430 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL512283.1-201ENST00000606756 1384 ntBASIC6.68□□□□□ -1.34
DKK3Q9UBP4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DKK3Q9UBP4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC068446.1-201ENST00000556425 1549 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 RNU6-819P-201ENST00000364116 107 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AL049697.3-201ENST00000406493 982 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 RANP6-201ENST00000413691 644 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 TRGV7-201ENST00000427089 353 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 CCNJP1-201ENST00000450600 1149 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 SULT1D1P-201ENST00000458020 882 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC135999.1-201ENST00000478962 479 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC119751.4-201ENST00000507498 357 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 SCARNA5-201ENST00000516201 276 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 SNORA70.17-201ENST00000516449 133 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 HNRNPRP2-201ENST00000528421 743 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC009268.1-201ENST00000561352 1203 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC234775.3-201ENST00000564612 656 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC084824.5-201ENST00000612009 413 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AC005277.2-201ENST00000617898 390 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 NEK2P4-201ENST00000425793 1329 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 AL512310.3-201ENST00000547023 1335 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms