Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 AL356608.1-201ENST00000610034 820 ntBASIC7.06□□□□□ -1.28
CD248Q9HCU0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 AL590065.1-201ENST00000603371 4774 ntBASIC7.06□□□□□ -1.28
CD248Q9HCU0 AP002800.1-201ENST00000624982 2225 ntBASIC7.06□□□□□ -1.28
CD248Q9HCU0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.06□□□□□ -1.28
CD248Q9HCU0 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD248Q9HCU0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 RN7SKP189-201ENST00000365042 330 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 SNORD116-2-201ENST00000384274 95 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 SNORD116-6-201ENST00000384711 96 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 MIR122-201ENST00000385044 85 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 OR1F12-201ENST00000402365 945 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AL596268.1-201ENST00000427910 1048 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC128677.1-201ENST00000436016 442 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 LSM3P3-201ENST00000436601 306 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 ATP5C1P1-201ENST00000441945 895 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AL031681.1-201ENST00000443304 400 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC099670.1-201ENST00000455141 783 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 RN7SKP198-201ENST00000459286 306 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC096992.1-201ENST00000459808 709 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC128716.1-201ENST00000475129 166 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AP005202.1-201ENST00000489915 867 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC112184.1-201ENST00000505179 312 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC146944.3-201ENST00000509969 371 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC117522.2-201ENST00000510049 657 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 RN7SKP183-201ENST00000517169 324 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AP005902.2-201ENST00000518393 307 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 IGKV2-4-201ENST00000523070 340 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 OR4A1P-201ENST00000532342 920 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC010615.3-201ENST00000597319 394 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC133794.1-201ENST00000602731 914 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC015802.5-201ENST00000607478 399 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC104184.1-201ENST00000607513 721 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC120053.1-201ENST00000607706 736 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AL359091.2-201ENST00000609303 556 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC009120.7-201ENST00000623452 780 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AC012254.5-201ENST00000623573 478 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 CLUHP10-201ENST00000631979 980 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 OR5AC4P-202ENST00000642086 985 ntBASIC7.05□□□□□ -1.28
CD248Q9HCU0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CD248Q9HCU0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD248Q9HCU0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms