Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AC090114.3-201ENST00000479267 829 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AL359704.2-201ENST00000604335 521 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AC027348.2-201ENST00000624375 642 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 MIR199B-201ENST00000384849 110 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AL590139.1-201ENST00000416267 400 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 SLC35E1P1-201ENST00000419313 864 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 OR52B5P-201ENST00000435337 951 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 RAB9BP1-201ENST00000519581 626 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AC126177.5-201ENST00000549599 178 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 OR52B5P-202ENST00000641118 1110 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 NEK2P4-201ENST00000425793 1329 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AL512310.3-201ENST00000547023 1335 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 AC062022.1-201ENST00000451026 1684 ntBASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC113412.1-201ENST00000425840 504 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC005297.1-201ENST00000444765 862 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 MORF4-201ENST00000447135 971 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 RN7SL561P-201ENST00000488553 281 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 IGBP1P5-201ENST00000507524 1000 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ACTR3C-206ENST00000613959 5142 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 SNORA70.2-201ENST00000364506 135 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 RPS7P3-201ENST00000443360 580 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 MRPS16P1-201ENST00000523462 412 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 HMGB1P42-201ENST00000532126 553 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.01□□□□□ -1.61
CSMD1Q96PZ7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms