Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 RNA5SP301-201ENST00000362537 121 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 MIR128-2-201ENST00000384893 84 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 EEF1GP6-201ENST00000402309 905 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 RN7SKP273-201ENST00000411392 314 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 TPT1P2-201ENST00000413105 503 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 CEACAMP8-201ENST00000413902 580 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 PRELID3BP10-201ENST00000431957 584 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 RPL7AP2-201ENST00000496515 740 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AL031073.1-201ENST00000503029 1139 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 ARL4AP1-201ENST00000503220 705 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC098799.3-201ENST00000506095 438 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 HSPE1P23-201ENST00000509838 286 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC090159.1-201ENST00000525309 806 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AGGF1P4-201ENST00000568249 801 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC090699.1-201ENST00000586264 321 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC008759.1-201ENST00000589783 983 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC073544.2-201ENST00000601155 540 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 WISP1-OT1-201ENST00000602893 642 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC027271.1-201ENST00000610270 610 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC084876.1-201ENST00000612793 641 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC006338.2-201ENST00000616864 791 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AL136981.2-201ENST00000617319 734 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AC245033.3-201ENST00000617986 224 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC97Q96F63 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.12□□□□□ -1.11
CCDC97Q96F63 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC97Q96F63 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC011477.1-204ENST00000623416 1325 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC012360.3-201ENST00000610036 3449 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC97Q96F63 RNU1-21P-201ENST00000363327 163 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 Y_RNA.311-201ENST00000365068 96 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC093392.1-201ENST00000366280 340 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 OR5H15-201ENST00000383696 930 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 OR6C64P-201ENST00000419708 825 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 PUDPP1-201ENST00000421058 495 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC006366.1-201ENST00000422002 759 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 AL049758.1-201ENST00000423154 397 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.11□□□□□ -1.11
CCDC97Q96F63 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC97Q96F63 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms