Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 SNX18P24-201ENST00000505249 671 ntBASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 CYP4F27P-201ENST00000514557 494 ntBASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 OR4A6P-201ENST00000534364 970 ntBASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 ZNF402P-201ENST00000404435 3100 ntBASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 AC092724.1-201ENST00000624623 3397 ntBASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDKL3Q8IVW4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC090220.1-201ENST00000593078 1699 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RNA5SP346-201ENST00000363541 121 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 YWHAZP4-201ENST00000392459 708 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RPL23AP17-201ENST00000401064 499 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RAB28P2-201ENST00000454299 641 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 SETP4-201ENST00000455717 868 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RN7SKP67-201ENST00000515905 235 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RNU2-45P-201ENST00000516068 187 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RNA5SP206-201ENST00000516703 121 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC008429.4-201ENST00000521201 182 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 HMGN1P26-201ENST00000558737 303 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 GLYATL1P2-202ENST00000588046 902 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC004890.3-201ENST00000605566 1095 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 GAPDHP41-201ENST00000613707 975 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AL137067.2-201ENST00000621202 131 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDKL3Q8IVW4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 RPL11P4-201ENST00000332269 436 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 PRELID1P1-201ENST00000403549 660 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL354707.3-201ENST00000427308 331 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms