Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RPL5P13-201ENST00000462840 709 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC007547.2-201ENST00000468802 360 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC010587.2-201ENST00000511727 448 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC021001.1-201ENST00000518703 987 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AL137072.1-201ENST00000603444 466 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AL159169.2-201ENST00000610061 1269 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC026336.5-201ENST00000624455 738 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 PCMTD1P7-201ENST00000634506 357 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC243725.1-201ENST00000637164 436 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 MFSD8-245ENST00000641743 948 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 VN2R3P-201ENST00000422626 1412 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC108099.1-201ENST00000564402 3258 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC007998.4-201ENST00000612496 2533 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 RNU6-500P-201ENST00000362349 107 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 Y_RNA.813-201ENST00000364639 102 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 RN7SKP50-201ENST00000364694 315 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 RNU1-16P-201ENST00000365477 164 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL034417.1-201ENST00000399343 800 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL512430.2-201ENST00000406786 339 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC104651.1-201ENST00000427559 735 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC010975.2-201ENST00000427781 588 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 MORF4L1P5-201ENST00000433352 961 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC231532.1-201ENST00000438584 312 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC093392.2-201ENST00000450682 337 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL035407.2-201ENST00000454090 378 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL354872.1-201ENST00000456361 967 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 RPLP0P1-201ENST00000457002 361 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL603882.1-201ENST00000463059 681 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 SNRPD2P1-201ENST00000489253 354 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 PDCL3P4-201ENST00000489621 720 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms