Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR5AM1P-201ENST00000532136 1032 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AP000873.5-201ENST00000533906 236 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR8L1P-201ENST00000534005 955 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 LINC00556-201ENST00000569603 412 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 GARSP1-201ENST00000570895 719 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC055876.5-201ENST00000605667 259 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 Z99129.1-201ENST00000612510 255 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC013476.2-201ENST00000614456 459 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL162574.1-201ENST00000615702 950 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC112204.3-201ENST00000623822 332 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC110769.3-201ENST00000624567 1173 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC099654.5-201ENST00000636479 350 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 SAMMSON-209ENST00000641222 1100 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PDZK1P1-202ENST00000425209 1350 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 NF1P8-201ENST00000415351 1461 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL133320.1-201ENST00000621423 2352 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 HSPD1P9-201ENST00000420325 1636 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 TRIM60P14-201ENST00000513444 1419 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RN7SKP63-201ENST00000363187 301 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RNU5B-1-201ENST00000363286 116 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RN7SKP174-201ENST00000363803 330 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 ATP5F1P4-201ENST00000397288 746 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CNN3P1-201ENST00000401596 935 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 ARL4AP5-201ENST00000404372 599 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RPSAP44-201ENST00000406712 884 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RN7SKP131-201ENST00000410698 301 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 Z68694.1-201ENST00000413929 841 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 MTND4P3-201ENST00000417829 541 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC000362.1-201ENST00000433725 425 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC000041.1-201ENST00000439655 175 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RAB11AP1-201ENST00000442978 646 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RPSAP49-201ENST00000445182 886 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CDC42P2-201ENST00000448566 569 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 FGF7P6-202ENST00000451282 293 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 OR7E62P-201ENST00000456741 477 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 HIGD1AP10-201ENST00000527837 282 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC068790.1-201ENST00000536166 355 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms