Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 FAM32BP-201ENST00000344033 333 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 RNU1-84P-201ENST00000365447 164 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AL033519.1-201ENST00000407266 307 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 U3.43-201ENST00000410734 213 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC007568.1-201ENST00000422912 471 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC002075.1-201ENST00000457396 676 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC091965.3-201ENST00000506236 208 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC139713.1-202ENST00000512366 460 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC022784.5-201ENST00000522241 437 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 EIF1AXP2-201ENST00000555940 413 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 TPRX1P1-201ENST00000557620 319 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AP000919.1-201ENST00000582850 985 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC022001.1-201ENST00000605193 268 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC005899.6-201ENST00000620729 297 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 MRPL57P1-201ENST00000621486 265 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC005261.6-201ENST00000623072 1387 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 RNA5SP350-201ENST00000363298 111 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AL451046.1-201ENST00000406097 534 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AL035696.2-201ENST00000407941 709 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 ARMC4P1-201ENST00000438905 707 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC022206.1-201ENST00000495947 347 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC092944.2-201ENST00000605443 889 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 394.9 ms