Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CTR9Q6PD62 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.51□□□□□ -1.21
CTR9Q6PD62 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTR9Q6PD62 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC105235.1-201ENST00000623208 1816 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 RNA5SP110-201ENST00000362638 115 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 RNA5SP346-201ENST00000363541 121 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 MIR621-201ENST00000384919 96 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 RN7SKP121-201ENST00000410842 305 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC097721.1-201ENST00000427150 1253 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC007679.3-201ENST00000434035 414 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 RN7SL254P-201ENST00000460609 284 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 RN7SL326P-201ENST00000477493 296 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 SNX18P24-201ENST00000505249 671 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC108103.1-201ENST00000511286 446 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC005363.1-201ENST00000530779 351 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC002519.2-203ENST00000567043 837 ntBASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.5□□□□□ -1.21
CTR9Q6PD62 AL359976.1-201ENST00000418655 3528 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AL157831.2-201ENST00000564681 3095 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 RAB5CP1-201ENST00000395972 580 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC245884.2-201ENST00000426257 404 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AL138899.2-201ENST00000439139 499 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 RPL34P33-201ENST00000486062 334 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 RPL17P2-201ENST00000491913 451 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 OR7E99P-201ENST00000505750 922 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AP005136.2-201ENST00000583253 1049 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC024255.1-201ENST00000614376 102 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 IFIT1P1-201ENST00000400497 1449 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 CAP1P2-201ENST00000417455 1409 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC083837.1-201ENST00000565297 2994 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.49□□□□□ -1.21
CTR9Q6PD62 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms