Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ALFQ53S48 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.72□□□□□ -1.33
ALFQ53S48 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.72□□□□□ -1.33
ALFQ53S48 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.72□□□□□ -1.33
ALFQ53S48 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ALFQ53S48 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
ALFQ53S48 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
ALFQ53S48 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
ALFQ53S48 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 MT-RNR1-201ENST00000389680 954 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ALFQ53S48 RNA5SP105-201ENST00000391123 113 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 RN7SKP129-201ENST00000410288 299 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 AL512504.1-201ENST00000415494 778 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 RPL7AP51-201ENST00000422016 760 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.71□□□□□ -1.34
ALFQ53S48 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 FABP5P2-201ENST00000439042 408 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.71□□□□□ -1.34
ALFQ53S48 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.71□□□□□ -1.34
ALFQ53S48 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.71□□□□□ -1.34
ALFQ53S48 AC245291.3-201ENST00000443400 292 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.71□□□□□ -1.34
ALFQ53S48 RPS18P1-201ENST00000447840 458 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AL451063.1-201ENST00000450164 1133 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 MORF4L1P4-201ENST00000450245 976 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.71□□□□□ -1.34
ALFQ53S48 RPL9P15-201ENST00000491096 532 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC018645.1-201ENST00000505003 109 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.71□□□□□ -1.34
ALFQ53S48 UGT2A3P7-201ENST00000510485 734 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 IGLV3-6-201ENST00000523937 250 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.71□□□□□ -1.34
ALFQ53S48 AL133399.1-201ENST00000527476 298 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.71□□□□□ -1.34
ALFQ53S48 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ALFQ53S48 MIR5095-201ENST00000578844 88 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.71□□□□□ -1.34
ALFQ53S48 AC012368.3-201ENST00000604190 219 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 AC025171.4-201ENST00000607250 1047 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AC012467.1-201ENST00000607740 256 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 RMST_5.1-201ENST00000618704 126 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 AL133370.2-201ENST00000619934 439 ntBASIC6.71□□□□□ -1.34
ALFQ53S48 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.71□□□□□ -1.34
ALFQ53S48 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.71□□□□□ -1.34
ALFQ53S48 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ALFQ53S48 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 MAPK10-261ENST00000641050 3109 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 AL591848.4-201ENST00000567832 3472 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 AC062029.1-202ENST00000606164 3651 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.7□□□□□ -1.34
ALFQ53S48 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.7□□□□□ -1.34
ALFQ53S48 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
ALFQ53S48 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
ALFQ53S48 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.7□□□□□ -1.34
ALFQ53S48 AL139415.1-201ENST00000424862 352 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 AL645939.3-201ENST00000435408 225 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 LINC00328-2P-201ENST00000436585 219 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 AC234771.2-201ENST00000445718 597 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 CCRL1P1-201ENST00000449542 1053 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 RARRES2P3-201ENST00000457739 473 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.7□□□□□ -1.34
ALFQ53S48 RPS7P10-201ENST00000464254 603 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.7□□□□□ -1.34
ALFQ53S48 H3F3AP3-201ENST00000497682 407 ntBASIC6.7□□□□□ -1.34
ALFQ53S48 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ALFQ53S48 PSMA2P2-201ENST00000504319 686 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms