Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CHEK2P5-201ENST00000423877 246 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 IGLV3-4-201ENST00000432300 244 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 PCBP2P1-201ENST00000437262 977 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 OR3D1P-201ENST00000438288 955 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 ZNF619P1-201ENST00000446539 752 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 RANP2-201ENST00000456833 229 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC073916.1-201ENST00000545095 130 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC007956.1-201ENST00000555623 542 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC009120.3-201ENST00000563335 499 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC013731.1-201ENST00000604340 883 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC006924.1-201ENST00000610750 559 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 MIR6886-201ENST00000619864 61 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC096708.4-201ENST00000620563 552 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 MAPK10-344ENST00000641718 3746 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC011815.2-201ENST00000618230 2021 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 RNF19BPY-201ENST00000458209 1550 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 CASC19-238ENST00000641523 1558 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 CYP2G2P-201ENST00000594920 1485 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC092724.1-201ENST00000624623 3397 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC087752.1-201ENST00000391360 558 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 RPS21P8-201ENST00000413365 247 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AL512593.1-201ENST00000444758 779 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 FTLP8-201ENST00000446770 267 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.26□□□□□ -1.25
SHROOM1Q2M3G4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms