Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC130360.1-201ENST00000425489 1117 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 RPL6P30-201ENST00000443382 862 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC002553.3-201ENST00000453002 341 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC114728.1-201ENST00000488289 483 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AL035690.1-201ENST00000490892 383 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC090958.1-201ENST00000511122 351 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC130365.2-201ENST00000525882 1201 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC073333.2-201ENST00000603589 769 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 EIF3EP1-201ENST00000433978 1316 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 NBPF8-201ENST00000583271 5330 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AL096711.1-201ENST00000404780 554 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 HMGN1P20-201ENST00000411849 300 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 RPL7L1P3-201ENST00000455249 689 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AC253576.1-201ENST00000511645 1156 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 CR383658.1-201ENST00000514609 734 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AC068305.2-201ENST00000550567 1205 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AC020916.2-201ENST00000591242 360 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AC008555.7-201ENST00000605008 583 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AL512356.3-201ENST00000623005 461 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 AL359091.1-201ENST00000449048 1734 ntBASIC7.49□□□□□ -1.21
RFX7Q2KHR2 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX7Q2KHR2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 OR7E25P-201ENST00000344844 931 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 RNA5SP477-201ENST00000362639 119 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 AL096800.1-201ENST00000405326 893 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 RPL7AP14-201ENST00000424041 802 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 IGLV3-4-201ENST00000432300 244 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 CST12P-201ENST00000457644 362 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 UGT2A3P7-201ENST00000510485 734 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 AC090651.1-201ENST00000567865 634 ntBASIC7.48□□□□□ -1.21
RFX7Q2KHR2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms