Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
PDS5AQ29RF7 NBPF8-201ENST00000583271 5330 ntBASIC7.44□□□□□ -1.22
PDS5AQ29RF7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AL359091.1-201ENST00000449048 1734 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AL117339.4-201ENST00000608335 7063 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AL137918.1-201ENST00000624542 1922 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC107980.1-201ENST00000558671 3355 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CT45A11P-201ENST00000448043 1134 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC092865.1-201ENST00000544395 1023 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC027243.2-201ENST00000602530 724 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC141002.1-201ENST00000607025 279 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC096861.1-201ENST00000616652 240 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AL136228.1-201ENST00000622221 319 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AL157831.2-201ENST00000564681 3095 ntBASIC7.43□□□□□ -1.22
PDS5AQ29RF7 AC005618.1-201ENST00000606901 3148 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC011815.2-201ENST00000618230 2021 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AL591848.4-201ENST00000567832 3472 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC084782.1-201ENST00000564401 2465 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 RNFT1P3-201ENST00000340898 1052 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 SLC20A1P1-201ENST00000413906 956 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 RPS15AP30-201ENST00000420976 390 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 RPL12P12-201ENST00000424633 501 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 VN1R110P-201ENST00000438988 971 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 GEMIN2P1-201ENST00000454246 752 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AL136131.3-201ENST00000607600 188 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 MIR6793-201ENST00000612376 63 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 AC079414.3-201ENST00000612986 1090 ntBASIC7.42□□□□□ -1.22
PDS5AQ29RF7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms