Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 NDUFB5P1-201ENST00000508134 564 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.54□□□□□ -1.04
PTCH1Q13635 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC096861.1-201ENST00000616652 240 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 CCL14-204ENST00000622526 472 ntTSL 3 BASIC8.54□□□□□ -1.04
PTCH1Q13635 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.54□□□□□ -1.04
PTCH1Q13635 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
PTCH1Q13635 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC109780.1-201ENST00000451768 1344 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.54□□□□□ -1.04
PTCH1Q13635 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.54□□□□□ -1.04
PTCH1Q13635 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 AP000866.6-201ENST00000638898 3579 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 RNA5SP46-201ENST00000362370 120 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 RNA5SP514-201ENST00000363717 111 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 RNU4-34P-201ENST00000410431 124 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 AL596448.1-201ENST00000415024 392 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.54□□□□□ -1.04
PTCH1Q13635 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC026254.2-201ENST00000475295 371 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 PCNAP4-201ENST00000532690 730 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.54□□□□□ -1.04
PTCH1Q13635 MIR3189-201ENST00000578735 73 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.54□□□□□ -1.04
PTCH1Q13635 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC006058.1-201ENST00000568686 5067 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.53□□□□□ -1.04
PTCH1Q13635 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
PTCH1Q13635 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.53□□□□□ -1.04
PTCH1Q13635 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.53□□□□□ -1.04
PTCH1Q13635 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 MAPK10-371ENST00000641952 5209 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 UGT2B27P-201ENST00000505092 1620 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
PTCH1Q13635 WDR95P-201ENST00000425638 1542 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 U3.7-201ENST00000363668 216 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 AK4P4-201ENST00000419465 646 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 RPS27P18-201ENST00000431701 247 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 AC002504.1-201ENST00000438281 691 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 RPS23P6-201ENST00000466136 431 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 AC138866.2-201ENST00000508650 584 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.53□□□□□ -1.04
PTCH1Q13635 HMGN2P36-201ENST00000529541 409 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.53□□□□□ -1.04
PTCH1Q13635 OR7A11P-201ENST00000597719 953 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 MIR6748-201ENST00000610433 71 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.53□□□□□ -1.04
PTCH1Q13635 MIR193BHG-214ENST00000641765 509 ntBASIC8.53□□□□□ -1.04
PTCH1Q13635 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTCH1Q13635 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
PTCH1Q13635 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.52□□□□□ -1.04
PTCH1Q13635 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PTCH1Q13635 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.52□□□□□ -1.04
PTCH1Q13635 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC8.52□□□□□ -1.04
PTCH1Q13635 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PTCH1Q13635 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PTCH1Q13635 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTCH1Q13635 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.52□□□□□ -1.05
PTCH1Q13635 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTCH1Q13635 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTCH1Q13635 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTCH1Q13635 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.52□□□□□ -1.05
PTCH1Q13635 RPS15AP30-201ENST00000420976 390 ntBASIC8.52□□□□□ -1.05
PTCH1Q13635 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PTCH1Q13635 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.52□□□□□ -1.05
PTCH1Q13635 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.52□□□□□ -1.05
PTCH1Q13635 H2AFZP6-201ENST00000444403 394 ntBASIC8.52□□□□□ -1.05
PTCH1Q13635 MGAT2P1-201ENST00000449718 797 ntBASIC8.52□□□□□ -1.05
PTCH1Q13635 AC011225.1-201ENST00000457751 369 ntBASIC8.52□□□□□ -1.05
PTCH1Q13635 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.52□□□□□ -1.05
PTCH1Q13635 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTCH1Q13635 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.52□□□□□ -1.05
PTCH1Q13635 AP001496.3-201ENST00000580230 913 ntBASIC8.52□□□□□ -1.05
PTCH1Q13635 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.52□□□□□ -1.05
PTCH1Q13635 CASC19-222ENST00000641321 1173 ntBASIC8.52□□□□□ -1.05
PTCH1Q13635 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PTCH1Q13635 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms