Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RN7SKP196-201ENST00000516267 345 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 RNA5SP75-201ENST00000516841 111 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 SCARNA11.1-201ENST00000516918 132 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC130366.1-201ENST00000526505 1192 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC006484.1-201ENST00000435086 1884 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 AC004023.1-201ENST00000561473 1744 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HIST1H1AQ02539 SAGE3P-201ENST00000619800 1635 ntBASIC4.83□□□□□ -1.64
HIST1H1AQ02539 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 BCORP1-203ENST00000513194 5093 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 RNA5SP478-201ENST00000364657 115 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 U3.52-201ENST00000384034 216 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC019178.1-201ENST00000392337 440 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 PTPN2P1-201ENST00000423212 1072 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL354766.1-201ENST00000423396 542 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 VN1R53P-201ENST00000429536 957 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL022237.1-201ENST00000446663 358 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 RPL7L1P3-201ENST00000455249 689 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 TREML3P-201ENST00000457327 501 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 NPM1P28-201ENST00000492269 840 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC106800.3-201ENST00000511389 308 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 SCARNA5-201ENST00000516201 276 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 IGKV1D-22-201ENST00000518953 324 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AP002004.1-206ENST00000532441 876 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 TXNP4-201ENST00000575018 310 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC019257.2-201ENST00000605539 497 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 MIR6085-201ENST00000618314 110 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 OR7A1P-202ENST00000641542 1158 ntBASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms