Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPL32P3-201ENST00000359025 275 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HSPG2P98160 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 RNA5SP305-201ENST00000362665 119 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 RNA5SP515-201ENST00000364570 118 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 AL035419.1-201ENST00000397037 564 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 AC093162.1-201ENST00000419682 124 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC3.61□□□□□ -1.83
HSPG2P98160 AC122718.1-201ENST00000439448 744 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 FAM133DP-201ENST00000464802 691 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 RPL32P33-201ENST00000487023 394 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 SSX8-201ENST00000506270 579 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 AC003992.1-201ENST00000635364 557 ntBASIC3.61□□□□□ -1.83
HSPG2P98160 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.61□□□□□ -1.83
HSPG2P98160 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HSPG2P98160 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HSPG2P98160 COX6B1P1-201ENST00000415962 213 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 TRGV7-201ENST00000427089 353 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AC044797.1-201ENST00000445744 679 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AC004129.2-201ENST00000457229 287 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.6□□□□□ -1.83
HSPG2P98160 GARSP1-201ENST00000570895 719 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
HSPG2P98160 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 CLCA3P-203ENST00000490028 2781 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.6□□□□□ -1.83
HSPG2P98160 RNA5SP505-201ENST00000364748 108 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 PRPF38AP2-201ENST00000438179 851 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 AC025674.1-201ENST00000507074 324 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC3.6□□□□□ -1.83
HSPG2P98160 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 ERG-206ENST00000398911 4914 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms