Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL139384.2-201ENST00000613809 3590 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 CLCA3P-203ENST00000490028 2781 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.09□□□□□ -1.43
CLDN6P56747 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.09□□□□□ -1.44
CLDN6P56747 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CLDN6P56747 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CLDN6P56747 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 U3.25-201ENST00000391209 220 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.08□□□□□ -1.44
CLDN6P56747 RPL23AP85-201ENST00000421838 433 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN6P56747 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 RN7SL714P-201ENST00000487050 298 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 IGKV2-19-201ENST00000518132 283 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 AL591767.3-201ENST00000554632 525 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AC007956.1-201ENST00000555623 542 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AC016180.1-201ENST00000567945 403 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN6P56747 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 FAM72A-208ENST00000607379 1139 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 SNORA74.4-201ENST00000607595 199 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 MIR6719-201ENST00000622428 87 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 AL049767.1-202ENST00000637826 242 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 CASC19-238ENST00000641523 1558 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 AC007114.2-201ENST00000576014 4281 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN6P56747 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLDN6P56747 MROH3P-201ENST00000435735 2676 ntBASIC6.08□□□□□ -1.44
CLDN6P56747 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN6P56747 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN6P56747 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.07□□□□□ -1.44
CLDN6P56747 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
CLDN6P56747 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
CLDN6P56747 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 AL136984.1-201ENST00000607611 1893 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN6P56747 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLDN6P56747 AL354890.1-201ENST00000413730 346 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN6P56747 AL513325.1-201ENST00000417716 1034 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN6P56747 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.07□□□□□ -1.44
CLDN6P56747 MARK2P12-201ENST00000420129 585 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.07□□□□□ -1.44
CLDN6P56747 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.07□□□□□ -1.44
CLDN6P56747 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 HMGN1P36-201ENST00000446623 298 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN6P56747 BZW1P1-201ENST00000454901 1240 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 AC023141.9-201ENST00000458734 412 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 RN7SL643P-201ENST00000471845 291 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 RNA5SP434-201ENST00000516647 121 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.07□□□□□ -1.44
CLDN6P56747 AC112191.2-201ENST00000522428 333 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 NATP-201ENST00000523491 878 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 AC015818.6-201ENST00000584274 634 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 AC108673.3-201ENST00000609183 335 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 RN7SL787P-201ENST00000613000 284 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 AC131009.3-201ENST00000621809 287 ntBASIC6.07□□□□□ -1.44
CLDN6P56747 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN6P56747 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN6P56747 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms