Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PDX1P52945 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.17□□□□□ -1.42
PDX1P52945 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 AL645936.1-201ENST00000441979 518 ntBASIC6.17□□□□□ -1.42
PDX1P52945 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.17□□□□□ -1.42
PDX1P52945 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PDX1P52945 AL590004.3-202ENST00000445883 451 ntBASIC6.17□□□□□ -1.42
PDX1P52945 VN1R96P-201ENST00000446052 858 ntBASIC6.17□□□□□ -1.42
PDX1P52945 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.17□□□□□ -1.42
PDX1P52945 AC022415.1-202ENST00000486612 523 ntBASIC6.17□□□□□ -1.42
PDX1P52945 AC023818.1-201ENST00000498379 384 ntBASIC6.17□□□□□ -1.42
PDX1P52945 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 IGLV3-6-201ENST00000523937 250 ntBASIC6.17□□□□□ -1.42
PDX1P52945 AP004607.6-201ENST00000525033 1202 ntBASIC6.17□□□□□ -1.42
PDX1P52945 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 LINC00556-201ENST00000569603 412 ntBASIC6.17□□□□□ -1.42
PDX1P52945 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.17□□□□□ -1.42
PDX1P52945 AC026124.2-201ENST00000621847 656 ntBASIC6.17□□□□□ -1.42
PDX1P52945 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
PDX1P52945 AC110716.2-201ENST00000563865 3945 ntBASIC6.17□□□□□ -1.42
PDX1P52945 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PDX1P52945 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.17□□□□□ -1.42
PDX1P52945 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.17□□□□□ -1.42
PDX1P52945 AC008957.3-201ENST00000624112 2242 ntBASIC6.17□□□□□ -1.42
PDX1P52945 CASC19-228ENST00000641414 1684 ntBASIC6.17□□□□□ -1.42
PDX1P52945 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.16□□□□□ -1.42
PDX1P52945 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDX1P52945 RNA5SP110-201ENST00000362638 115 ntBASIC6.16□□□□□ -1.42
PDX1P52945 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.16□□□□□ -1.42
PDX1P52945 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 AL139415.1-201ENST00000424862 352 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 RPL12P31-201ENST00000478433 450 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 AC083906.1-201ENST00000509298 406 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AC073581.1-201ENST00000519036 575 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 AC027369.2-201ENST00000528030 440 ntBASIC6.16□□□□□ -1.42
PDX1P52945 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 AC012146.2-201ENST00000576545 416 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AC008507.3-201ENST00000585753 472 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.16□□□□□ -1.42
PDX1P52945 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 AC027243.2-201ENST00000602530 724 ntBASIC6.16□□□□□ -1.42
PDX1P52945 BUB1P1-201ENST00000603541 607 ntBASIC6.16□□□□□ -1.42
PDX1P52945 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.16□□□□□ -1.42
PDX1P52945 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 AC092266.1-201ENST00000610958 165 ntBASIC6.16□□□□□ -1.42
PDX1P52945 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.16□□□□□ -1.42
PDX1P52945 AC002044.3-201ENST00000623314 541 ntBASIC6.16□□□□□ -1.42
PDX1P52945 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 AL596275.2-208ENST00000641192 594 ntBASIC6.16□□□□□ -1.42
PDX1P52945 AP002370.1-201ENST00000528055 1602 ntBASIC6.16□□□□□ -1.42
PDX1P52945 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms