Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA2P51531 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC10.73□□□□□ -0.69
SMARCA2P51531 EEF1A1P24-201ENST00000451469 1378 ntBASIC10.73□□□□□ -0.69
SMARCA2P51531 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SMARCA2P51531 AL139148.1-201ENST00000427122 680 ntBASIC10.73□□□□□ -0.69
SMARCA2P51531 AC092967.1-201ENST00000449016 481 ntBASIC10.73□□□□□ -0.69
SMARCA2P51531 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC10.73□□□□□ -0.69
SMARCA2P51531 HIGD1AP14-201ENST00000507617 282 ntBASIC10.73□□□□□ -0.69
SMARCA2P51531 AC109481.1-201ENST00000509173 282 ntBASIC10.73□□□□□ -0.69
SMARCA2P51531 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC10.73□□□□□ -0.69
SMARCA2P51531 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC10.73□□□□□ -0.69
SMARCA2P51531 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA2P51531 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC10.73□□□□□ -0.69
SMARCA2P51531 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SMARCA2P51531 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SMARCA2P51531 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC10.72□□□□□ -0.69
SMARCA2P51531 AL049634.1-201ENST00000453770 1720 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA2P51531 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
SMARCA2P51531 AL592429.1-201ENST00000403909 1473 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA2P51531 AC105342.1-201ENST00000378334 6848 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA2P51531 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA2P51531 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC10.72□□□□□ -0.69
SMARCA2P51531 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA2P51531 CUBNP2-201ENST00000443534 1139 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA2P51531 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC10.72□□□□□ -0.69
SMARCA2P51531 AC008629.2-201ENST00000503783 483 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC10.72□□□□□ -0.69
SMARCA2P51531 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SMARCA2P51531 OR5D15P-201ENST00000531671 942 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC10.72□□□□□ -0.69
SMARCA2P51531 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC10.72□□□□□ -0.69
SMARCA2P51531 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC10.72□□□□□ -0.69
SMARCA2P51531 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC10.72□□□□□ -0.69
SMARCA2P51531 AL445222.1-201ENST00000607259 628 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 AL512329.2-201ENST00000607350 548 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 MIR8080-201ENST00000622224 89 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 AC073342.3-201ENST00000624211 193 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 CASC19-264ENST00000641912 1184 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 AC105235.1-201ENST00000623208 1816 ntBASIC10.72□□□□□ -0.69
SMARCA2P51531 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
SMARCA2P51531 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.72□□□□□ -0.69
SMARCA2P51531 AL161756.3-201ENST00000641216 2071 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC10.71□□□□□ -0.69
SMARCA2P51531 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA2P51531 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC10.71□□□□□ -0.69
SMARCA2P51531 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC10.71□□□□□ -0.69
SMARCA2P51531 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA2P51531 RN7SKP103-201ENST00000363848 320 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 RN7SKP273-201ENST00000411392 314 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 CYP4F30P-202ENST00000420048 405 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA2P51531 IGKV1OR10-1-201ENST00000442306 329 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 RPS7P3-201ENST00000443360 580 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 IGKV1OR22-5-201ENST00000458718 354 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC10.71□□□□□ -0.69
SMARCA2P51531 RPSAP73-201ENST00000614820 330 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA2P51531 AC012254.5-201ENST00000623573 478 ntBASIC10.71□□□□□ -0.69
SMARCA2P51531 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA2P51531 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC10.71□□□□□ -0.7
SMARCA2P51531 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC10.71□□□□□ -0.7
SMARCA2P51531 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA2P51531 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
SMARCA2P51531 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA2P51531 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.7
SMARCA2P51531 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA2P51531 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA2P51531 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
SMARCA2P51531 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SMARCA2P51531 MIR433-201ENST00000384837 93 ntBASIC10.7□□□□□ -0.7
SMARCA2P51531 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC10.7□□□□□ -0.7
SMARCA2P51531 AL139415.1-201ENST00000424862 352 ntBASIC10.7□□□□□ -0.7
SMARCA2P51531 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC10.7□□□□□ -0.7
SMARCA2P51531 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC10.7□□□□□ -0.7
SMARCA2P51531 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC10.7□□□□□ -0.7
SMARCA2P51531 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC10.7□□□□□ -0.7
SMARCA2P51531 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC10.7□□□□□ -0.7
SMARCA2P51531 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC10.7□□□□□ -0.7
SMARCA2P51531 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SMARCA2P51531 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA2P51531 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA2P51531 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA2P51531 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.7□□□□□ -0.7
SMARCA2P51531 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SMARCA2P51531 RPS12P17-201ENST00000438591 377 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC10.69□□□□□ -0.7
SMARCA2P51531 RPL35AP19-201ENST00000469425 329 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.69□□□□□ -0.7
SMARCA2P51531 RNA5SP400-201ENST00000517155 111 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 OR56A7P-201ENST00000524865 941 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC10.69□□□□□ -0.7
SMARCA2P51531 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC10.69□□□□□ -0.7
SMARCA2P51531 AC119403.2-201ENST00000590960 598 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 AL139407.1-201ENST00000613826 1175 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms