Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC119674.1-201ENST00000641611 1210 ntBASIC6.67□□□□□ -1.34
HOXC12P31275 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HOXC12P31275 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC12P31275 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 THAP12P6-201ENST00000431978 2310 ntBASIC6.67□□□□□ -1.34
HOXC12P31275 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HOXC12P31275 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC12P31275 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 Z99129.4-201ENST00000624649 2435 ntBASIC6.67□□□□□ -1.34
HOXC12P31275 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
HOXC12P31275 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 AC116158.1-201ENST00000560231 2129 ntBASIC6.67□□□□□ -1.34
HOXC12P31275 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC12P31275 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC12P31275 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC091544.5-201ENST00000620192 3815 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 COL6A4P1-202ENST00000487147 4317 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HOXC12P31275 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC12P31275 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HOXC12P31275 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 RN7SKP211-201ENST00000363328 315 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 Y_RNA.201-201ENST00000364052 96 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 SNORD116-4-201ENST00000384733 96 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HOXC12P31275 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 CHMP1B2P-201ENST00000399581 597 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 OR7E156P-201ENST00000400303 464 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 SNORA11.5-201ENST00000408163 128 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 AL365203.2-201ENST00000423444 196 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HOXC12P31275 AL138787.1-202ENST00000437804 898 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 CUBNP2-201ENST00000443534 1139 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC016772.1-201ENST00000444170 1261 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AC002075.1-201ENST00000457396 676 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 RPS4XP19-201ENST00000460237 736 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 RPL12P40-201ENST00000467028 488 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXC12P31275 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 NPM1P21-201ENST00000513394 762 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AL117351.2-201ENST00000513571 157 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 RFPL4AP3-201ENST00000515267 345 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 TMEM97P2-201ENST00000517841 403 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 SNX18P27-201ENST00000523611 779 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXC12P31275 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC011193.2-201ENST00000582638 367 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
HOXC12P31275 AC005518.2-201ENST00000603254 282 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AC021749.1-201ENST00000604322 607 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AL391903.2-201ENST00000614532 247 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 pRNA.9-201ENST00000618609 89 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AC005899.6-201ENST00000620729 297 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AC018659.2-201ENST00000624690 715 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC12P31275 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC12P31275 TRIM64EP-201ENST00000531233 1307 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 AL512310.3-201ENST00000547023 1335 ntBASIC6.66□□□□□ -1.34
HOXC12P31275 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC12P31275 MAPK10-261ENST00000641050 3109 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms