Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL133247.2-201ENST00000603236 482 ntBASIC7.62□□□□□ -1.19
CNGA1P29973 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNGA1P29973 BNIP3P35-201ENST00000604530 490 ntBASIC7.62□□□□□ -1.19
CNGA1P29973 AC111186.1-201ENST00000604684 130 ntBASIC7.62□□□□□ -1.19
CNGA1P29973 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNGA1P29973 AL135999.3-201ENST00000610501 812 ntBASIC7.62□□□□□ -1.19
CNGA1P29973 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.62□□□□□ -1.19
CNGA1P29973 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.62□□□□□ -1.19
CNGA1P29973 AP006248.3-201ENST00000623580 594 ntBASIC7.62□□□□□ -1.19
CNGA1P29973 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.62□□□□□ -1.19
CNGA1P29973 TATDN2P3-201ENST00000452855 3665 ntBASIC7.62□□□□□ -1.19
CNGA1P29973 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CNGA1P29973 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNGA1P29973 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNGA1P29973 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.62□□□□□ -1.19
CNGA1P29973 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CNGA1P29973 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.62□□□□□ -1.19
CNGA1P29973 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.62□□□□□ -1.19
CNGA1P29973 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
CNGA1P29973 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.61□□□□□ -1.19
CNGA1P29973 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.61□□□□□ -1.19
CNGA1P29973 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CNGA1P29973 SMG1P5-202ENST00000529428 4219 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 SMG1P2-201ENST00000566127 4221 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 AC007068.1-201ENST00000396690 844 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 ST13P16-201ENST00000401760 781 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.61□□□□□ -1.19
CNGA1P29973 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.61□□□□□ -1.19
CNGA1P29973 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 AC099782.1-201ENST00000425889 474 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.61□□□□□ -1.19
CNGA1P29973 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.61□□□□□ -1.19
CNGA1P29973 Z83838.1-202ENST00000456225 839 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.61□□□□□ -1.19
CNGA1P29973 AC096754.1-201ENST00000508904 818 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 RNU6-889P-201ENST00000517189 103 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.61□□□□□ -1.19
CNGA1P29973 EEF1B2P2-201ENST00000519625 676 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 GTF2IP11-201ENST00000526931 420 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.61□□□□□ -1.19
CNGA1P29973 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 SYPL1P2-201ENST00000582878 727 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
CNGA1P29973 CASC19-238ENST00000641523 1558 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 MROH3P-201ENST00000435735 2676 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.61□□□□□ -1.19
CNGA1P29973 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 Z83820.1-201ENST00000456978 1499 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CNGA1P29973 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNGA1P29973 AC010168.2-201ENST00000562691 5428 ntBASIC7.61□□□□□ -1.19
CNGA1P29973 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.61□□□□□ -1.19
CNGA1P29973 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.6□□□□□ -1.19
CNGA1P29973 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CNGA1P29973 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.6□□□□□ -1.19
CNGA1P29973 RPL9P21-201ENST00000392269 505 ntBASIC7.6□□□□□ -1.19
CNGA1P29973 AL356057.1-202ENST00000402263 756 ntBASIC7.6□□□□□ -1.19
CNGA1P29973 GCNT1P4-201ENST00000404096 329 ntBASIC7.6□□□□□ -1.19
CNGA1P29973 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.6□□□□□ -1.19
CNGA1P29973 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.6□□□□□ -1.19
CNGA1P29973 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNGA1P29973 COX4I1P2-201ENST00000447446 547 ntBASIC7.6□□□□□ -1.19
CNGA1P29973 RAB28P3-201ENST00000448325 597 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms