Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
COL9A1P20849 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
COL9A1P20849 RNU2-42P-201ENST00000410697 113 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 TIMM8AP1-201ENST00000419283 295 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC8.69□□□□□ -1.02
COL9A1P20849 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.69□□□□□ -1.02
COL9A1P20849 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC009961.2-201ENST00000435771 251 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC8.69□□□□□ -1.02
COL9A1P20849 AL731563.1-201ENST00000442202 214 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 RPS7P4-201ENST00000444127 582 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 AL672138.1-201ENST00000450604 1015 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 IFNA22P-201ENST00000458710 570 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC114981.1-201ENST00000503897 678 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 UGT2A3P7-201ENST00000510485 734 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.69□□□□□ -1.02
COL9A1P20849 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC8.69□□□□□ -1.02
COL9A1P20849 PHBP2-201ENST00000532859 806 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AL162311.2-201ENST00000550416 709 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 CHCHD3P2-201ENST00000550751 639 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC011193.2-201ENST00000582638 367 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.69□□□□□ -1.02
COL9A1P20849 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC011453.2-201ENST00000603737 729 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 AC092807.2-201ENST00000609367 243 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.69□□□□□ -1.02
COL9A1P20849 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC8.69□□□□□ -1.02
COL9A1P20849 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 RLIMP2-201ENST00000427891 1563 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 AC091046.3-201ENST00000631455 1574 ntBASIC8.69□□□□□ -1.02
COL9A1P20849 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
COL9A1P20849 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL9A1P20849 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 EIF4BP4-201ENST00000441847 1780 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 OR2A3P-202ENST00000641249 1776 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 GFM1-210ENST00000486715 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
COL9A1P20849 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
COL9A1P20849 MIR425-201ENST00000362162 87 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 Y_RNA.387-201ENST00000383918 102 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 Y_RNA.579-201ENST00000390939 94 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 SNORA11D-201ENST00000408548 128 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 SNORA11E-201ENST00000408778 128 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 RN7SKP181-201ENST00000411188 316 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 MTCO2P5-201ENST00000422621 426 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AL353678.1-201ENST00000422735 741 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 PSMD8P1-201ENST00000436275 769 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.68□□□□□ -1.02
COL9A1P20849 MTND6P13-201ENST00000443510 523 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AC079448.1-201ENST00000449377 373 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 NDUFA5P7-201ENST00000452914 242 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 C1DP4-201ENST00000455429 424 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 RPLP0P1-201ENST00000457002 361 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 ATP5J2P4-201ENST00000538774 267 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 NF1P12-201ENST00000549593 583 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 AL049870.4-201ENST00000555741 486 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC010547.7-201ENST00000570323 333 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AC005668.1-201ENST00000571142 476 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 575.3 ms