Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXD8P13378 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXD8P13378 MRPS10P2-201ENST00000431226 381 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 RPL6P30-201ENST00000443382 862 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 HMGB3P6-201ENST00000444896 598 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXD8P13378 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 RPL23AP8-201ENST00000479812 475 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 RN7SL88P-201ENST00000480166 299 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AC074386.1-206ENST00000487102 761 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 OR2A3P-201ENST00000493774 953 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.92□□□□□ -1.14
HOXD8P13378 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXD8P13378 NDUFB4P12-201ENST00000513465 390 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXD8P13378 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXD8P13378 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXD8P13378 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.92□□□□□ -1.14
HOXD8P13378 CHEK2P2-201ENST00000554701 672 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXD8P13378 AC093524.1-201ENST00000564266 1094 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 AC090616.2-202ENST00000584248 222 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXD8P13378 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXD8P13378 AC009955.2-201ENST00000597288 542 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AL365181.4-201ENST00000609800 547 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 AL158063.1-201ENST00000615349 536 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 RMST_10.1-201ENST00000616309 154 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXD8P13378 AF246928.1-201ENST00000623768 87 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
HOXD8P13378 AC016251.1-201ENST00000624299 4198 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXD8P13378 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXD8P13378 NCLP2-201ENST00000416078 1462 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXD8P13378 AC016582.1-202ENST00000636341 2982 ntBASIC7.92□□□□□ -1.14
HOXD8P13378 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HOXD8P13378 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXD8P13378 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC010886.1-201ENST00000437380 2869 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
HOXD8P13378 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 RNU6-697P-201ENST00000363348 107 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 RNU6-694P-201ENST00000364071 147 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
HOXD8P13378 RNA5SP176-201ENST00000390956 110 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 ATF1P1-201ENST00000406040 927 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 AL390774.1-201ENST00000411924 246 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 RPLP1P10-201ENST00000413972 339 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 SPATA20P1-201ENST00000423089 438 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 AL593851.1-201ENST00000426171 157 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 RPL3P11-201ENST00000434028 1146 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 NANOGP2-201ENST00000435391 727 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC000041.1-201ENST00000439655 175 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXD8P13378 OR51P1P-201ENST00000447547 942 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 RPL7AP71-201ENST00000451120 739 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 AC234781.3-201ENST00000452540 973 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXD8P13378 RPS27AP16-201ENST00000492222 470 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 PGAM4P2-201ENST00000512491 721 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 MINOS1P4-201ENST00000515470 318 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXD8P13378 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 AL121766.1-201ENST00000547436 487 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC073333.2-201ENST00000603589 769 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 RPS4XP21-201ENST00000603814 750 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 AC063962.1-201ENST00000608199 521 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms