Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCL4P13236 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.84□□□□□ -1.47
CCL4P13236 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCL4P13236 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCL4P13236 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCL4P13236 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CCL4P13236 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.84□□□□□ -1.47
CCL4P13236 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCL4P13236 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.84□□□□□ -1.48
CCL4P13236 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC5.84□□□□□ -1.48
CCL4P13236 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCL4P13236 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCL4P13236 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCL4P13236 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.84□□□□□ -1.48
CCL4P13236 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL4P13236 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL4P13236 AC015689.2-201ENST00000528172 1738 ntBASIC5.83□□□□□ -1.48
CCL4P13236 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL4P13236 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 AC005831.1-201ENST00000624384 1697 ntBASIC5.83□□□□□ -1.48
CCL4P13236 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 RNA5SP350-201ENST00000363298 111 ntBASIC5.83□□□□□ -1.48
CCL4P13236 AL096829.1-201ENST00000413677 457 ntBASIC5.83□□□□□ -1.48
CCL4P13236 UBE2V1P14-201ENST00000415815 558 ntBASIC5.83□□□□□ -1.48
CCL4P13236 BX284632.2-201ENST00000421091 399 ntBASIC5.83□□□□□ -1.48
CCL4P13236 AL035660.1-201ENST00000422041 222 ntBASIC5.83□□□□□ -1.48
CCL4P13236 GAPDHP75-201ENST00000433910 943 ntBASIC5.83□□□□□ -1.48
CCL4P13236 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL4P13236 AL512605.1-202ENST00000441919 381 ntBASIC5.83□□□□□ -1.48
CCL4P13236 TRIM60P16-201ENST00000444048 694 ntBASIC5.83□□□□□ -1.48
CCL4P13236 AL359955.2-201ENST00000445380 353 ntBASIC5.83□□□□□ -1.48
CCL4P13236 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL4P13236 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 WBP1LP3-201ENST00000523033 208 ntBASIC5.83□□□□□ -1.48
CCL4P13236 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL4P13236 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL4P13236 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL4P13236 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL4P13236 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCL4P13236 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CCL4P13236 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 TNPO1P2-201ENST00000426249 2665 ntBASIC5.83□□□□□ -1.48
CCL4P13236 AP002364.1-201ENST00000623330 3386 ntBASIC5.83□□□□□ -1.48
CCL4P13236 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL4P13236 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCL4P13236 AC092111.1-201ENST00000618256 3358 ntBASIC5.83□□□□□ -1.48
CCL4P13236 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL4P13236 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCL4P13236 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.82□□□□□ -1.48
CCL4P13236 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CCL4P13236 RNA5SP375-201ENST00000362975 119 ntBASIC5.82□□□□□ -1.48
CCL4P13236 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCL4P13236 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 AC245060.4-201ENST00000413293 1121 ntBASIC5.82□□□□□ -1.48
CCL4P13236 Z68694.1-201ENST00000413929 841 ntBASIC5.82□□□□□ -1.48
CCL4P13236 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.82□□□□□ -1.48
CCL4P13236 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.82□□□□□ -1.48
CCL4P13236 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.82□□□□□ -1.48
CCL4P13236 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL4P13236 SUMO2P10-201ENST00000452006 288 ntBASIC5.82□□□□□ -1.48
CCL4P13236 SNX18P26-201ENST00000458433 740 ntBASIC5.82□□□□□ -1.48
CCL4P13236 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.82□□□□□ -1.48
CCL4P13236 AC092865.4-201ENST00000477936 615 ntBASIC5.82□□□□□ -1.48
CCL4P13236 RN7SL717P-201ENST00000478343 297 ntBASIC5.82□□□□□ -1.48
CCL4P13236 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL4P13236 SETP21-201ENST00000514799 892 ntBASIC5.82□□□□□ -1.48
CCL4P13236 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL4P13236 AC112191.2-201ENST00000522428 333 ntBASIC5.82□□□□□ -1.48
CCL4P13236 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL4P13236 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL4P13236 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL4P13236 ZNF322P1-201ENST00000568013 1209 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms