Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CHGAP10645 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CHGAP10645 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CHGAP10645 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CHGAP10645 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CHGAP10645 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CHGAP10645 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CHGAP10645 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 AL049776.1-201ENST00000624600 2025 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 Y_RNA.813-201ENST00000364639 102 ntBASIC10.94□□□□□ -0.66
CHGAP10645 OLA1P1-201ENST00000396387 1189 ntBASIC10.94□□□□□ -0.66
CHGAP10645 VN1R12P-201ENST00000403778 876 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AL451061.1-201ENST00000407887 862 ntBASIC10.94□□□□□ -0.66
CHGAP10645 TPMTP3-201ENST00000411928 735 ntBASIC10.94□□□□□ -0.66
CHGAP10645 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 AC009362.1-201ENST00000427253 406 ntBASIC10.94□□□□□ -0.66
CHGAP10645 ATP5F1P1-201ENST00000433775 569 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AL356133.1-201ENST00000444762 372 ntBASIC10.94□□□□□ -0.66
CHGAP10645 EPS15P1-201ENST00000448836 336 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC003071.1-201ENST00000451219 789 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC005517.1-201ENST00000452091 489 ntBASIC10.94□□□□□ -0.66
CHGAP10645 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 TSACC-207ENST00000470342 601 ntTSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 AC025271.1-201ENST00000485045 429 ntBASIC10.94□□□□□ -0.66
CHGAP10645 NCOR1P1-202ENST00000486162 291 ntBASIC10.94□□□□□ -0.66
CHGAP10645 FTH1P23-201ENST00000492727 550 ntBASIC10.94□□□□□ -0.66
CHGAP10645 CHCHD2P7-201ENST00000508008 452 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC10.94□□□□□ -0.66
CHGAP10645 AC090835.1-201ENST00000515189 1024 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC10.94□□□□□ -0.66
CHGAP10645 RN7SKP244-201ENST00000516513 307 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 AC063943.3-201ENST00000615562 356 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC135068.5-201ENST00000624197 983 ntBASIC10.94□□□□□ -0.66
CHGAP10645 CASC22-202ENST00000628396 802 ntTSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC10.94□□□□□ -0.66
CHGAP10645 AC099654.14-201ENST00000638599 341 ntBASIC10.94□□□□□ -0.66
CHGAP10645 AC073869.7-201ENST00000640874 297 ntBASIC10.94□□□□□ -0.66
CHGAP10645 SAMMSON-214ENST00000641395 1264 ntBASIC10.94□□□□□ -0.66
CHGAP10645 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
CHGAP10645 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC10.94□□□□□ -0.66
CHGAP10645 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CHGAP10645 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 AC051619.3-201ENST00000560646 2426 ntBASIC10.93□□□□□ -0.66
CHGAP10645 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 RNY4P24-201ENST00000362735 96 ntBASIC10.93□□□□□ -0.66
CHGAP10645 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 PAICSP7-201ENST00000419829 962 ntBASIC10.93□□□□□ -0.66
CHGAP10645 MTCO3P1-205ENST00000422088 832 ntBASIC10.93□□□□□ -0.66
CHGAP10645 RWDD4P2-201ENST00000426392 563 ntBASIC10.93□□□□□ -0.66
CHGAP10645 ARAFP2-201ENST00000440565 559 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AL353898.1-201ENST00000444055 238 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC114755.5-201ENST00000447760 831 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 YRDCP3-201ENST00000456507 480 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC091959.2-201ENST00000477363 321 ntBASIC10.93□□□□□ -0.66
CHGAP10645 RN7SL612P-201ENST00000497704 295 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC008629.3-201ENST00000505786 586 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 SNORA31.13-201ENST00000516624 135 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC092709.1-201ENST00000521355 1045 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms