Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM3P06753 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM3P06753 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM3P06753 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM3P06753 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM3P06753 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM3P06753 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
TPM3P06753 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM3P06753 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TPM3P06753 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TPM3P06753 RNA5SP382-201ENST00000363355 112 ntBASIC6.92□□□□□ -1.3
TPM3P06753 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 RPL3P11-201ENST00000434028 1146 ntBASIC6.92□□□□□ -1.3
TPM3P06753 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 RPL6P24-201ENST00000445338 864 ntBASIC6.92□□□□□ -1.3
TPM3P06753 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TPM3P06753 RAB28P2-201ENST00000454299 641 ntBASIC6.92□□□□□ -1.3
TPM3P06753 UOX-201ENST00000471089 899 ntBASIC6.92□□□□□ -1.3
TPM3P06753 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM3P06753 AF305872.1-201ENST00000485217 471 ntBASIC6.92□□□□□ -1.3
TPM3P06753 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 NPM1P21-201ENST00000513394 762 ntBASIC6.92□□□□□ -1.3
TPM3P06753 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM3P06753 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM3P06753 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM3P06753 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM3P06753 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM3P06753 MIR4312-201ENST00000579909 76 ntBASIC6.92□□□□□ -1.3
TPM3P06753 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM3P06753 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM3P06753 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
TPM3P06753 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM3P06753 AC138907.8-201ENST00000623981 2256 ntBASIC6.92□□□□□ -1.3
TPM3P06753 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
TPM3P06753 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM3P06753 AL359091.1-201ENST00000449048 1734 ntBASIC6.91□□□□□ -1.3
TPM3P06753 RN7SKP128-201ENST00000364270 303 ntBASIC6.91□□□□□ -1.3
TPM3P06753 U3.10-201ENST00000364459 214 ntBASIC6.91□□□□□ -1.3
TPM3P06753 RNA5SP302-201ENST00000364896 100 ntBASIC6.91□□□□□ -1.3
TPM3P06753 RN7SKP281-201ENST00000410472 352 ntBASIC6.91□□□□□ -1.3
TPM3P06753 SETP22-201ENST00000412243 957 ntBASIC6.91□□□□□ -1.3
TPM3P06753 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 AC009303.1-201ENST00000426307 352 ntBASIC6.91□□□□□ -1.3
TPM3P06753 MED28P4-201ENST00000433137 572 ntBASIC6.91□□□□□ -1.3
TPM3P06753 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM3P06753 PCMTD1P3-201ENST00000451824 472 ntBASIC6.91□□□□□ -1.3
TPM3P06753 CBX5P1-201ENST00000468470 561 ntBASIC6.91□□□□□ -1.3
TPM3P06753 RPL5P15-201ENST00000475870 897 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM3P06753 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM3P06753 AC090958.1-201ENST00000511122 351 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM3P06753 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM3P06753 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM3P06753 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM3P06753 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.91□□□□□ -1.3
TPM3P06753 AC092718.4-201ENST00000566639 716 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AC015674.1-201ENST00000578482 267 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AF186192.2-204ENST00000581667 524 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AC060780.2-201ENST00000589047 198 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM3P06753 AC004805.3-201ENST00000603178 310 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AL022394.1-201ENST00000606979 292 ntBASIC6.91□□□□□ -1.3
TPM3P06753 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM3P06753 RAB28P4-201ENST00000622233 665 ntBASIC6.91□□□□□ -1.3
TPM3P06753 AC079776.5-201ENST00000641920 211 ntBASIC6.91□□□□□ -1.3
TPM3P06753 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 AC005261.6-201ENST00000623072 1387 ntBASIC6.91□□□□□ -1.3
TPM3P06753 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM3P06753 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM3P06753 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM3P06753 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TPM3P06753 RPL31P11-201ENST00000426558 1558 ntBASIC6.91□□□□□ -1.3
TPM3P06753 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM3P06753 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TPM3P06753 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms