Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC114728.1-201ENST00000488289 483 ntBASIC6.43□□□□□ -1.38
APOA4P06727 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.43□□□□□ -1.38
APOA4P06727 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.43□□□□□ -1.38
APOA4P06727 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.43□□□□□ -1.38
APOA4P06727 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.43□□□□□ -1.38
APOA4P06727 AC008676.3-201ENST00000521237 435 ntBASIC6.43□□□□□ -1.38
APOA4P06727 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.43□□□□□ -1.38
APOA4P06727 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.43□□□□□ -1.38
APOA4P06727 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.43□□□□□ -1.38
APOA4P06727 AC092718.4-201ENST00000566639 716 ntBASIC6.43□□□□□ -1.38
APOA4P06727 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.43□□□□□ -1.38
APOA4P06727 AP000919.1-201ENST00000582850 985 ntBASIC6.43□□□□□ -1.38
APOA4P06727 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.43□□□□□ -1.38
APOA4P06727 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.43□□□□□ -1.38
APOA4P06727 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.43□□□□□ -1.38
APOA4P06727 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.43□□□□□ -1.38
APOA4P06727 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.43□□□□□ -1.38
APOA4P06727 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.43□□□□□ -1.38
APOA4P06727 MIR6503-201ENST00000622884 86 ntBASIC6.43□□□□□ -1.38
APOA4P06727 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.43□□□□□ -1.38
APOA4P06727 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 AC005225.5-201ENST00000623547 2225 ntBASIC6.43□□□□□ -1.38
APOA4P06727 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 AP000547.3-204ENST00000588548 2523 ntBASIC6.43□□□□□ -1.38
APOA4P06727 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 CASC19-238ENST00000641523 1558 ntBASIC6.43□□□□□ -1.38
APOA4P06727 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
APOA4P06727 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOA4P06727 FANCD2P2-201ENST00000437591 1400 ntBASIC6.42□□□□□ -1.38
APOA4P06727 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 Z95114.1-201ENST00000624264 14574 ntBASIC6.42□□□□□ -1.38
APOA4P06727 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.42□□□□□ -1.38
APOA4P06727 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
APOA4P06727 SHQ1P1-201ENST00000437111 1544 ntBASIC6.42□□□□□ -1.38
APOA4P06727 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.42□□□□□ -1.38
APOA4P06727 FUNDC2P3-201ENST00000334716 533 ntBASIC6.42□□□□□ -1.38
APOA4P06727 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.42□□□□□ -1.38
APOA4P06727 RPL5P20-201ENST00000403848 896 ntBASIC6.42□□□□□ -1.38
APOA4P06727 CASKP1-201ENST00000412870 582 ntBASIC6.42□□□□□ -1.38
APOA4P06727 CDY17P-201ENST00000414121 1282 ntBASIC6.42□□□□□ -1.38
APOA4P06727 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.42□□□□□ -1.38
APOA4P06727 CDY8P-201ENST00000428380 1279 ntBASIC6.42□□□□□ -1.38
APOA4P06727 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.42□□□□□ -1.38
APOA4P06727 AL590399.4-201ENST00000436561 601 ntBASIC6.42□□□□□ -1.38
APOA4P06727 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.42□□□□□ -1.38
APOA4P06727 CDY20P-201ENST00000447528 1279 ntBASIC6.42□□□□□ -1.38
APOA4P06727 OR6C72P-201ENST00000451403 892 ntBASIC6.42□□□□□ -1.38
APOA4P06727 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
APOA4P06727 AC093870.1-201ENST00000506837 213 ntBASIC6.42□□□□□ -1.38
APOA4P06727 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.42□□□□□ -1.38
APOA4P06727 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.42□□□□□ -1.38
APOA4P06727 RN7SKP67-201ENST00000515905 235 ntBASIC6.42□□□□□ -1.38
APOA4P06727 HMGN1P26-201ENST00000558737 303 ntBASIC6.42□□□□□ -1.38
APOA4P06727 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.42□□□□□ -1.38
APOA4P06727 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.42□□□□□ -1.38
APOA4P06727 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.42□□□□□ -1.38
APOA4P06727 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
APOA4P06727 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
APOA4P06727 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
APOA4P06727 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
APOA4P06727 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
APOA4P06727 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.42□□□□□ -1.38
APOA4P06727 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.42□□□□□ -1.38
APOA4P06727 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOA4P06727 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.41□□□□□ -1.38
APOA4P06727 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.41□□□□□ -1.38
APOA4P06727 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
APOA4P06727 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.41□□□□□ -1.38
APOA4P06727 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
APOA4P06727 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 OR7E25P-201ENST00000344844 931 ntBASIC6.41□□□□□ -1.38
APOA4P06727 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.41□□□□□ -1.38
APOA4P06727 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
APOA4P06727 GAPDHP75-201ENST00000433910 943 ntBASIC6.41□□□□□ -1.38
APOA4P06727 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.41□□□□□ -1.38
APOA4P06727 COL11A2P1-205ENST00000441798 676 ntBASIC6.41□□□□□ -1.38
APOA4P06727 AL022237.1-201ENST00000446663 358 ntBASIC6.41□□□□□ -1.38
APOA4P06727 AL445991.1-201ENST00000450381 475 ntBASIC6.41□□□□□ -1.38
APOA4P06727 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 259.8 ms