Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC093267.1-201ENST00000489176 961 ntBASIC3.65□□□□□ -1.82
APOBP04114 AC091965.3-201ENST00000506236 208 ntBASIC3.65□□□□□ -1.82
APOBP04114 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 MIR4646-201ENST00000580775 63 ntBASIC3.65□□□□□ -1.82
APOBP04114 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.65□□□□□ -1.82
APOBP04114 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.65□□□□□ -1.82
APOBP04114 OR52B5P-202ENST00000641118 1110 ntBASIC3.65□□□□□ -1.82
APOBP04114 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
APOBP04114 MAPK10-263ENST00000641052 4307 ntBASIC3.65□□□□□ -1.83
APOBP04114 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBP04114 AC104164.1-201ENST00000460282 590 ntBASIC3.65□□□□□ -1.83
APOBP04114 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 BTF3P13-201ENST00000513224 490 ntBASIC3.65□□□□□ -1.83
APOBP04114 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC3.65□□□□□ -1.83
APOBP04114 AC105749.1-201ENST00000631338 2008 ntBASIC3.65□□□□□ -1.83
APOBP04114 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
APOBP04114 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
APOBP04114 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBP04114 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
APOBP04114 SNORA70.2-201ENST00000364506 135 ntBASIC3.65□□□□□ -1.83
APOBP04114 U3.36-201ENST00000408418 213 ntBASIC3.65□□□□□ -1.83
APOBP04114 RMRPP5-201ENST00000411156 267 ntBASIC3.65□□□□□ -1.83
APOBP04114 AL049745.1-201ENST00000433953 286 ntBASIC3.65□□□□□ -1.83
APOBP04114 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.65□□□□□ -1.83
APOBP04114 AC015864.1-201ENST00000496512 544 ntBASIC3.65□□□□□ -1.83
APOBP04114 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBP04114 AC020937.1-201ENST00000519677 1013 ntBASIC3.65□□□□□ -1.83
APOBP04114 NMNAT1P5-201ENST00000559657 841 ntBASIC3.65□□□□□ -1.83
APOBP04114 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBP04114 GARSP1-201ENST00000570895 719 ntBASIC3.65□□□□□ -1.83
APOBP04114 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBP04114 LINC01739-205ENST00000641890 573 ntBASIC3.65□□□□□ -1.83
APOBP04114 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBP04114 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
APOBP04114 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 AC002090.1-201ENST00000625000 2138 ntBASIC3.64□□□□□ -1.83
APOBP04114 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
APOBP04114 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 RNA5SP211-201ENST00000365516 117 ntBASIC3.64□□□□□ -1.83
APOBP04114 SNORA16A-201ENST00000384342 137 ntBASIC3.64□□□□□ -1.83
APOBP04114 RN7SL738P-201ENST00000470264 297 ntBASIC3.64□□□□□ -1.83
APOBP04114 AC096741.1-201ENST00000472250 846 ntBASIC3.64□□□□□ -1.83
APOBP04114 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.64□□□□□ -1.83
APOBP04114 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.64□□□□□ -1.83
APOBP04114 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.64□□□□□ -1.83
APOBP04114 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 GTF2IP4-201ENST00000453092 2054 ntBASIC3.64□□□□□ -1.83
APOBP04114 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
APOBP04114 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms