Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 AL591135.1-201ENST00000401578 5914 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC020633.1-201ENST00000468439 2247 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CLPTM1O96005 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CLPTM1O96005 MYL6P3-201ENST00000436904 432 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
CLPTM1O96005 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC005017.1-201ENST00000482002 490 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 NATP-201ENST00000523491 878 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.94□□□□□ -1.46
CLPTM1O96005 MIR744-201ENST00000578242 98 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AL021368.3-201ENST00000607119 578 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC010809.3-201ENST00000621310 641 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 AC140479.4-205ENST00000636339 820 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 AC116667.2-201ENST00000641075 823 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 BCORP1-203ENST00000513194 5093 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 AC004158.1-201ENST00000564508 4319 ntBASIC5.94□□□□□ -1.46
CLPTM1O96005 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.93□□□□□ -1.46
CLPTM1O96005 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 RNU1-55P-201ENST00000365510 158 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 RPL18AP14-201ENST00000417685 526 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.93□□□□□ -1.46
CLPTM1O96005 RPL23AP64-201ENST00000469465 435 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC022730.1-201ENST00000473114 568 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 ASNSP4-201ENST00000511103 447 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 MTCYBP44-201ENST00000514835 823 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AP002004.1-206ENST00000532441 876 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AC084033.1-201ENST00000550830 633 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC089984.3-201ENST00000552838 363 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.93□□□□□ -1.46
CLPTM1O96005 PPIAP6-201ENST00000557078 499 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 MIR378C-201ENST00000578683 81 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AL161912.3-201ENST00000605404 628 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 MIR6070-201ENST00000613967 103 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC020658.4-201ENST00000613987 684 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 MIR6774-201ENST00000614651 70 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.93□□□□□ -1.46
CLPTM1O96005 AC091059.2-201ENST00000623355 614 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 AC073857.1-201ENST00000625082 1054 ntBASIC5.93□□□□□ -1.46
CLPTM1O96005 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.93□□□□□ -1.46
CLPTM1O96005 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.93□□□□□ -1.46
CLPTM1O96005 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CLPTM1O96005 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CLPTM1O96005 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLPTM1O96005 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms