Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 TRAV11-201ENST00000539512 339 ntBASIC6.02□□□□□ -1.45
SNX3O60493 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 AC090286.3-201ENST00000573133 187 ntBASIC6.02□□□□□ -1.45
SNX3O60493 AC015674.1-201ENST00000578482 267 ntBASIC6.02□□□□□ -1.45
SNX3O60493 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AP005212.4-201ENST00000614206 710 ntBASIC6.02□□□□□ -1.45
SNX3O60493 MIR7854-201ENST00000620068 65 ntBASIC6.02□□□□□ -1.45
SNX3O60493 BX005040.2-201ENST00000620504 370 ntBASIC6.02□□□□□ -1.45
SNX3O60493 AC005753.1-201ENST00000623837 618 ntBASIC6.02□□□□□ -1.45
SNX3O60493 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 FKBP1AP4-201ENST00000631775 336 ntBASIC6.02□□□□□ -1.45
SNX3O60493 LINC02495-203ENST00000636704 242 ntBASIC6.02□□□□□ -1.45
SNX3O60493 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.02□□□□□ -1.45
SNX3O60493 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AC132825.8-201ENST00000640783 297 ntBASIC6.02□□□□□ -1.45
SNX3O60493 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SNX3O60493 AP005435.3-201ENST00000531260 3198 ntBASIC6.02□□□□□ -1.45
SNX3O60493 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 AL034546.1-201ENST00000623740 3693 ntBASIC6.02□□□□□ -1.45
SNX3O60493 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
SNX3O60493 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.01□□□□□ -1.45
SNX3O60493 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.01□□□□□ -1.45
SNX3O60493 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 TET1P1-201ENST00000426627 2301 ntBASIC6.01□□□□□ -1.45
SNX3O60493 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 RN7SKP81-201ENST00000365603 331 ntBASIC6.01□□□□□ -1.45
SNX3O60493 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.01□□□□□ -1.45
SNX3O60493 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.01□□□□□ -1.45
SNX3O60493 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.01□□□□□ -1.45
SNX3O60493 AC090954.1-201ENST00000445502 361 ntBASIC6.01□□□□□ -1.45
SNX3O60493 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.01□□□□□ -1.45
SNX3O60493 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 FRG2FP-204ENST00000453982 852 ntBASIC6.01□□□□□ -1.45
SNX3O60493 RN7SL145P-201ENST00000469955 296 ntBASIC6.01□□□□□ -1.45
SNX3O60493 UOX-201ENST00000471089 899 ntBASIC6.01□□□□□ -1.45
SNX3O60493 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 RN7SL714P-201ENST00000487050 298 ntBASIC6.01□□□□□ -1.45
SNX3O60493 RPL23AP40-201ENST00000487630 390 ntBASIC6.01□□□□□ -1.45
SNX3O60493 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SNX3O60493 NPM1P28-201ENST00000492269 840 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AC105420.1-201ENST00000504389 582 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.01□□□□□ -1.45
SNX3O60493 AP005902.2-201ENST00000518393 307 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.01□□□□□ -1.45
SNX3O60493 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.01□□□□□ -1.45
SNX3O60493 AC090826.1-203ENST00000569235 490 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.01□□□□□ -1.45
SNX3O60493 AC005332.4-201ENST00000592752 579 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 pRNA.9-201ENST00000618609 89 ntBASIC6.01□□□□□ -1.45
SNX3O60493 AC005858.3-201ENST00000624756 589 ntBASIC6.01□□□□□ -1.45
SNX3O60493 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.01□□□□□ -1.45
SNX3O60493 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.01□□□□□ -1.45
SNX3O60493 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.01□□□□□ -1.45
SNX3O60493 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNX3O60493 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 DNM1P47-203ENST00000571780 12667 ntBASIC6□□□□□ -1.45
SNX3O60493 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 AC011416.1-201ENST00000514947 1732 ntBASIC6□□□□□ -1.45
SNX3O60493 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms