Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC011742.2-201ENST00000443818 352 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 RN7SL826P-201ENST00000479724 288 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 EIF3LP3-201ENST00000495197 822 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 NENFP3-201ENST00000503735 313 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 SNORA70.20-201ENST00000516848 126 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 RNU4ATAC-201ENST00000580972 127 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 AC119403.2-201ENST00000590960 598 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 AC116651.1-201ENST00000609724 556 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 AP001541.1-201ENST00000623322 1904 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 AC110597.1-201ENST00000562669 3176 ntBASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 FAM32BP-201ENST00000344033 333 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AP000534.2-201ENST00000412729 568 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AL451136.1-201ENST00000435399 325 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AC026254.2-201ENST00000475295 371 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AC024451.1-201ENST00000508013 779 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AC110056.1-201ENST00000525759 911 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AC022404.1-201ENST00000555320 273 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 AL589674.2-201ENST00000604304 337 ntBASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SHANK2Q9UPX8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC245060.4-201ENST00000413293 1121 ntBASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC093166.4-201ENST00000457867 318 ntBASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC024940.4-201ENST00000605507 246 ntBASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 AL359091.1-201ENST00000449048 1734 ntBASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.09□□□□□ -0.95
SHANK2Q9UPX8 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
SHANK2Q9UPX8 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC9.09□□□□□ -0.96
SHANK2Q9UPX8 MIR375-201ENST00000362103 64 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 RPS27P18-201ENST00000431701 247 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AL022237.1-201ENST00000446663 358 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 YWHAEP1-201ENST00000453697 763 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms