Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RIMBP3Q9UFD9 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 PSMC1P2-201ENST00000423961 1204 ntBASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 AC013701.1-201ENST00000522657 465 ntBASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC9.5□□□□□ -0.89
RIMBP3Q9UFD9 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RNA5SP319-201ENST00000362768 119 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RPL17P50-201ENST00000396131 546 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AL023284.3-201ENST00000407767 334 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AL390774.1-201ENST00000411924 246 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RN7SL870P-201ENST00000460111 296 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC026826.1-201ENST00000493002 361 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 PCNPP1-201ENST00000552501 511 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC091193.1-201ENST00000604640 448 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC012653.2-201ENST00000621880 420 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC034229.6-201ENST00000623704 224 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AL139384.2-201ENST00000613809 3590 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AP002370.1-201ENST00000528055 1602 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RNU105B-201ENST00000364478 208 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RNU4-4P-201ENST00000364588 130 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 RPS4XP9-201ENST00000405151 780 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC117395.1-201ENST00000487390 403 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 OR9L1P-201ENST00000529493 933 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC136624.4-201ENST00000573044 370 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC087385.3-201ENST00000620477 187 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 XRCC6P5-201ENST00000435236 1795 ntBASIC9.49□□□□□ -0.89
RIMBP3Q9UFD9 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 SPATA31C2-201ENST00000324915 3777 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 RPL17P36-201ENST00000420302 549 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AL450023.1-201ENST00000450868 751 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 PDCL3P4-201ENST00000489621 720 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 BMPR1APS2-201ENST00000527904 1012 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms