Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC025423.2-201ENST00000537570 439 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC007346.1-201ENST00000569208 867 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC097467.4-201ENST00000605504 141 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC092266.1-201ENST00000610958 165 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC104307.1-201ENST00000616142 196 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AL132640.3-201ENST00000630473 177 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 OR2AH1P-202ENST00000641232 2744 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 GUCY1B2-204ENST00000531898 1979 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AL157831.2-201ENST00000564681 3095 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 RNU1-49P-201ENST00000363468 159 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 SNORA40.4-201ENST00000390971 128 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC004386.1-201ENST00000393214 761 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC009500.1-201ENST00000420684 583 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC106901.1-201ENST00000425086 698 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 EIF2S2P3-201ENST00000428356 999 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 RPL12P11-201ENST00000439970 501 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC068768.2-201ENST00000602352 343 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC073333.2-201ENST00000603589 769 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC108865.2-201ENST00000606881 432 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC015982.1-201ENST00000608113 465 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AC004801.6-201ENST00000616571 978 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 AL512652.1-201ENST00000619006 500 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 MIR7159-201ENST00000620587 66 ntBASIC7.15□□□□□ -1.26
COL20A1Q9P218 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL20A1Q9P218 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL20A1Q9P218 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL20A1Q9P218 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL20A1Q9P218 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
COL20A1Q9P218 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.15□□□□□ -1.27
COL20A1Q9P218 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.15□□□□□ -1.27
COL20A1Q9P218 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL20A1Q9P218 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL20A1Q9P218 THAP12P8-201ENST00000447914 2115 ntBASIC7.15□□□□□ -1.27
COL20A1Q9P218 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
COL20A1Q9P218 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms