Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AP001284.1-201ENST00000528393 2118 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 RN7SKP229-201ENST00000410465 302 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC093878.1-201ENST00000515630 432 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 RN7SL199P-201ENST00000578752 281 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 RN7SL656P-201ENST00000579044 281 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 RN7SL270P-201ENST00000579643 281 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 RPL7AP69-201ENST00000595306 806 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 MIR6798-201ENST00000612887 67 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 OR1N1-202ENST00000619659 939 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AL442128.2-201ENST00000620246 1824 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC020658.2-201ENST00000559030 4020 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC092070.2-203ENST00000598377 3644 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 ATP5BP1-201ENST00000411980 1574 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 RACGAP1P-201ENST00000550663 1879 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 AC009120.2-204ENST00000621548 2032 ntBASIC6.47□□□□□ -1.37
TRIM4Q9C037 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM4Q9C037 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
TRIM4Q9C037 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.46□□□□□ -1.37
TRIM4Q9C037 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 AC102941.1-201ENST00000567616 1537 ntBASIC6.46□□□□□ -1.37
TRIM4Q9C037 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM4Q9C037 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.46□□□□□ -1.37
TRIM4Q9C037 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AL360271.1-201ENST00000395679 510 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AL359715.1-201ENST00000404330 555 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 SETP20-201ENST00000457046 852 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC110749.1-201ENST00000462007 357 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 SNORA26.10-201ENST00000516427 141 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC007537.1-201ENST00000539347 327 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 NPM1P5-201ENST00000557228 838 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC037479.1-201ENST00000558361 625 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AL132640.1-201ENST00000559594 619 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 CTSLP2-201ENST00000580501 394 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC011891.2-201ENST00000604949 397 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms