Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DNAJA1P6-201ENST00000437347 354 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 RPL23AP68-201ENST00000480924 445 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC083982.1-201ENST00000485679 344 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 BRD9P1-201ENST00000529855 560 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC063949.1-201ENST00000552900 865 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC104687.2-201ENST00000604442 342 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC010624.4-201ENST00000597606 1351 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC009804.1-201ENST00000400949 179 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC245452.2-201ENST00000435222 392 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC068587.1-201ENST00000483613 781 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC008897.1-201ENST00000494006 347 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AL645933.2-201ENST00000606743 1207 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 RPS2P45-201ENST00000469997 2057 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC137056.2-201ENST00000624055 1958 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 FO393409.1-201ENST00000399325 1372 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AL050335.1-201ENST00000396909 869 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 OR5M12P-201ENST00000423388 929 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 PDCL3P4-201ENST00000489621 720 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 MAPK10-350ENST00000641777 965 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 YES1P1-201ENST00000418510 1628 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 TDGF1P1-201ENST00000445734 527 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC106800.2-201ENST00000514009 1103 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 IGLV3-6-201ENST00000523937 250 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AP000676.2-201ENST00000529711 301 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC234771.5-201ENST00000600161 514 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AL049840.6-201ENST00000604583 345 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 AC091768.1-201ENST00000609258 930 ntBASIC5.03□□□□□ -1.6
CSMD1Q96PZ7 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSMD1Q96PZ7 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms