Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 SNORA38B-201ENST00000363524 131 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 RN7SKP257-201ENST00000364525 309 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 RN7SKP130-201ENST00000364924 301 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 RNA5SP355-201ENST00000365317 135 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC116036.1-201ENST00000412199 367 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 TMA16P2-201ENST00000413187 601 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 MGAT2P2-201ENST00000427194 797 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 SNRPBP1-201ENST00000443634 282 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC091965.3-201ENST00000506236 208 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC147055.1-201ENST00000509261 750 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 AL390198.2-201ENST00000510553 222 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC073575.2-201ENST00000614212 627 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AC073488.9-201ENST00000631601 754 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 AP001284.1-201ENST00000528393 2118 ntBASIC5.84□□□□□ -1.47
PTP4A1Q93096 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTP4A1Q93096 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.84□□□□□ -1.47
PTP4A1Q93096 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.84□□□□□ -1.48
PTP4A1Q93096 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
PTP4A1Q93096 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PTP4A1Q93096 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.84□□□□□ -1.48
PTP4A1Q93096 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.84□□□□□ -1.48
PTP4A1Q93096 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTP4A1Q93096 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.84□□□□□ -1.48
PTP4A1Q93096 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 Z95114.1-201ENST00000624264 14574 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC015799.1-201ENST00000622996 3122 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 GAPDHP15-201ENST00000398586 975 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL590635.1-201ENST00000406314 586 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL359092.1-201ENST00000417156 265 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC009303.1-201ENST00000426307 352 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 RPL3P11-201ENST00000434028 1146 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 GAPDHP20-201ENST00000444107 1007 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC010442.1-201ENST00000515583 816 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 IGKV2D-38-201ENST00000518423 240 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms