Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 OR2M1P-201ENST00000318104 951 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RNA5SP183-201ENST00000362452 119 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC005042.1-201ENST00000393397 800 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RN7SL561P-201ENST00000488553 281 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC037198.3-201ENST00000616754 526 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 PSMC1P2-201ENST00000423961 1204 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MORF4-201ENST00000447135 971 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 IGLV2-34-201ENST00000490007 283 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MIR4436B2-201ENST00000581415 91 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MIR4436B1-201ENST00000583272 91 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC023421.1-201ENST00000590535 1785 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 EPS15P1-202ENST00000459691 2071 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC110597.1-201ENST00000562669 3176 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RN7SKP279-201ENST00000411383 298 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 NENFP1-201ENST00000419476 466 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC113412.1-201ENST00000425840 504 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RPL10P14-201ENST00000565265 298 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 FAM25E-202ENST00000608562 189 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 MIR765-201ENST00000390226 114 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AL713922.1-201ENST00000416477 747 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RN7SL172P-201ENST00000460535 303 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RN7SL583P-201ENST00000475692 287 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RPS4XP1-201ENST00000482189 787 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms