Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 NIFKP3-201ENST00000417799 865 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 PTP4A1P5-201ENST00000420305 455 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 GPN3P1-201ENST00000423883 535 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 PSMD8P1-201ENST00000436275 769 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL135933.1-201ENST00000498657 802 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 SSX8-201ENST00000506270 579 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 ST13P12-201ENST00000508958 1094 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AP002004.1-206ENST00000532441 876 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AP000619.2-201ENST00000546014 969 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC089984.3-201ENST00000552838 363 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL135978.1-201ENST00000553618 1266 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 RN7SL667P-201ENST00000582817 298 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC079395.2-201ENST00000610982 737 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 pRNA.12-201ENST00000614353 90 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 pRNA.3-201ENST00000615048 90 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC087894.3-201ENST00000623682 349 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC092656.1-203ENST00000624134 423 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 MIR665-201ENST00000635949 72 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC068137.3-201ENST00000639191 341 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC073869.6-201ENST00000640656 341 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC009948.3-201ENST00000603415 1798 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC006058.1-201ENST00000568686 5067 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL034417.4-202ENST00000642135 2236 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AP003119.3-201ENST00000566747 4192 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 OR2A3P-202ENST00000641249 1776 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RNU6-636P-201ENST00000384598 107 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RN7SKP85-201ENST00000411349 318 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 MYO5BP3-201ENST00000431872 1279 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CHCHD4P5-201ENST00000436684 427 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 ARF4P4-201ENST00000439608 520 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RBMX2P4-201ENST00000441256 376 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 HMGN1P32-201ENST00000441744 256 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 MYO5BP2-201ENST00000449815 1277 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 FDX1P2-201ENST00000450769 375 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 GAPDHP53-201ENST00000458397 924 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC117395.2-201ENST00000463122 1128 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC008379.1-201ENST00000463655 464 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC040975.1-201ENST00000472104 316 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms