Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 Y_RNA.70-201ENST00000362886 110 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RNU6-839P-201ENST00000363347 108 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RNA5SP78-201ENST00000364622 118 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MIR1284-201ENST00000408337 120 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AL513302.1-201ENST00000415679 428 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC012498.1-201ENST00000424037 437 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MYO5BP3-201ENST00000431872 1279 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RPL21P110-201ENST00000433345 446 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC093799.1-201ENST00000452411 499 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 ENPP7P2-201ENST00000462675 943 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL74P-201ENST00000464966 299 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC087501.2-201ENST00000466869 581 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL263P-201ENST00000467969 290 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MTND6P6-201ENST00000478031 263 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL687P-201ENST00000480496 285 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 OR10J2P-201ENST00000514684 961 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 IGHV3-36-201ENST00000520848 401 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC087276.1-201ENST00000529659 480 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AP002383.5-201ENST00000542623 1161 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 PSMB7P1-201ENST00000556349 514 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC013565.2-201ENST00000564874 310 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC010650.1-201ENST00000567559 494 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL118P-201ENST00000580570 302 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC067796.1-201ENST00000586795 496 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AL158151.4-201ENST00000600965 507 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC104458.1-201ENST00000608243 463 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC018816.2-201ENST00000621460 353 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC007326.3-201ENST00000636418 176 ntBASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 CCT8P1-201ENST00000413611 1657 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC245100.2-201ENST00000454544 1679 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RNU5F-7P-201ENST00000363696 115 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP133-201ENST00000364845 340 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RNU4-12P-201ENST00000365233 139 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms