Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 MTCO1P11-201ENST00000429111 1528 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 MTCO1P9-201ENST00000505577 1534 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC073055.1-201ENST00000456901 1621 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 NLRP9P1-201ENST00000540920 2655 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 Y_RNA.394-201ENST00000383942 103 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CALM2P3-201ENST00000400429 449 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC019050.1-201ENST00000418508 492 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AL353729.1-201ENST00000425044 720 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AL009174.1-201ENST00000426577 416 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 Z80107.2-201ENST00000445127 392 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC239367.2-201ENST00000447309 705 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RPL23AP35-201ENST00000451906 501 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RN7SL395P-201ENST00000462960 291 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RPL5P17-201ENST00000469685 877 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RN7SL505P-201ENST00000482644 293 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC112184.1-201ENST00000505179 312 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 DUTP7-201ENST00000507982 486 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC044913.1-201ENST00000557200 430 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 PCMTD1P2-201ENST00000565017 355 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 RN7SL154P-201ENST00000578043 324 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 OR8G7P-201ENST00000616658 848 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC090181.3-201ENST00000624777 1514 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AC117529.2-201ENST00000512159 2068 ntBASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.57□□□□□ -1.04
SCUBE3Q8IX30 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 AC096745.2-201ENST00000627783 1914 ntBASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCUBE3Q8IX30 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms