Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 CXADRP1-201ENST00000398098 1095 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC245052.5-201ENST00000416320 649 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC245054.1-201ENST00000420944 258 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 NDUFS5P5-201ENST00000437256 321 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC099670.1-201ENST00000455141 783 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 RN7SL143P-201ENST00000496780 297 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC010285.3-201ENST00000511668 676 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 CR383658.1-201ENST00000514609 734 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 DUXAP2-201ENST00000519198 589 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 GLYATL1P4-201ENST00000529326 906 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 EIF4A3P1-201ENST00000578499 647 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC087683.1-201ENST00000591187 441 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 RPS4XP21-201ENST00000603814 750 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC091946.2-201ENST00000606105 291 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC010133.1-201ENST00000615809 842 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 EEF1A1P33-201ENST00000554413 1362 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AL356361.1-201ENST00000400943 1459 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC090132.1-201ENST00000524071 1480 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 AC126773.4-201ENST00000612545 3043 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 OR8B9P-202ENST00000642028 5216 ntBASIC9.19□□□□□ -0.94
RC3H1Q5TC82 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
RC3H1Q5TC82 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 RNA5SP472-201ENST00000363868 119 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 ATP5F1P3-201ENST00000397213 657 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LSM5-206ENST00000409987 504 ntTSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC012519.1-201ENST00000424588 610 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 RHEBP1-201ENST00000448647 556 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 MTND5P20-201ENST00000448677 143 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC084754.1-201ENST00000463466 464 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 CYCSP20-201ENST00000473154 315 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC108120.1-201ENST00000506543 991 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC008885.2-201ENST00000509506 930 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 IGLVI-42-201ENST00000522485 381 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC130364.2-201ENST00000528639 604 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 BGLT3-201ENST00000564523 994 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 CYP4A44P-201ENST00000569984 154 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 FGF7P1-201ENST00000582820 288 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 RN7SL178P-201ENST00000582930 304 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 RPS11-202ENST00000594493 575 ntTSL 3 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 MKI67P1-201ENST00000604297 1460 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC106791.2-201ENST00000604680 391 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 RN7SL126P-201ENST00000616400 299 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 265.5 ms