Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC096921.2-201ENST00000561507 1916 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AC015977.1-201ENST00000418887 292 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 HLA-DPA3-207ENST00000454398 229 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 RNA5SP340-201ENST00000517132 107 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AC079905.1-201ENST00000549280 475 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AL138895.2-201ENST00000603019 178 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 BX323046.1-201ENST00000610145 535 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AC009135.2-201ENST00000624136 1768 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.52□□□□□ -1.2
RFX7Q2KHR2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RFX7Q2KHR2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
RFX7Q2KHR2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 PPIAP10-201ENST00000438675 458 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 GAPDHP23-201ENST00000444823 993 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AC092332.1-201ENST00000563684 829 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 NPIPB1P-202ENST00000588786 828 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AP001823.1-201ENST00000604056 1003 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AC129915.3-201ENST00000634128 948 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 AC093225.1-201ENST00000506867 1408 ntBASIC7.52□□□□□ -1.21
RFX7Q2KHR2 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX7Q2KHR2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 CCNT2P1-201ENST00000423082 1315 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC242426.1-201ENST00000435270 960 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 OR2AF1P-201ENST00000454899 889 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AL022319.1-201ENST00000458183 1167 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 RPL34P33-201ENST00000486062 334 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 RNA5SP434-201ENST00000516647 121 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC027369.2-201ENST00000528030 440 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AL137067.2-201ENST00000621202 131 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 OR7A1P-202ENST00000641542 1158 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 HSPD1P9-201ENST00000420325 1636 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AP001541.1-201ENST00000623322 1904 ntBASIC7.51□□□□□ -1.21
RFX7Q2KHR2 AC011416.1-201ENST00000514947 1732 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 AC008627.1-201ENST00000517511 1704 ntBASIC7.5□□□□□ -1.21
RFX7Q2KHR2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
RFX7Q2KHR2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms