Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC109458.1-201ENST00000508858 316 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC023794.3-204ENST00000510754 236 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AP000619.1-201ENST00000540293 1000 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 UBE2NP1-201ENST00000545592 458 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC008555.1-201ENST00000561778 2757 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH1Q08174 RN7SL14P-201ENST00000579715 298 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC090415.1-201ENST00000581877 847 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC087683.1-201ENST00000591187 441 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC016727.1-205ENST00000605437 569 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC103724.4-201ENST00000605981 292 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC012640.3-201ENST00000607847 430 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC004520.1-201ENST00000608362 1413 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC100793.4-201ENST00000613683 429 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC009509.4-201ENST00000619202 509 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC008443.7-201ENST00000622195 246 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC079456.1-201ENST00000624010 480 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AC129908.1-201ENST00000624553 648 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AL358913.2-201ENST00000553881 1548 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDH1Q08174 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC119674.1-202ENST00000641333 1860 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 COL6A4P1-202ENST00000487147 4317 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 MARK2P4-201ENST00000503381 2380 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDH1Q08174 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 SSX6-201ENST00000376932 562 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 CST13P-201ENST00000376992 428 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 MIR575-201ENST00000385013 94 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 U3.28-201ENST00000391249 210 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 RNU6-920P-201ENST00000410926 92 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL356968.2-201ENST00000412769 1257 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDH1Q08174 EMC3-AS1-205ENST00000438698 534 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 RBMX2P4-201ENST00000441256 376 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL353898.1-201ENST00000444055 238 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC011979.1-201ENST00000472300 483 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC005550.2-201ENST00000476382 318 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 RPL9P33-201ENST00000484311 566 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 RN7SL153P-201ENST00000486501 292 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC010285.3-201ENST00000511668 676 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 OR5H7P-201ENST00000514084 930 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 Vault.2-201ENST00000516519 98 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC087883.1-201ENST00000551882 391 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 HIGD1AP17-201ENST00000554576 276 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC013283.1-201ENST00000557282 492 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC116553.2-201ENST00000564203 463 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms