Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 GARSP1-201ENST00000570895 719 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC109583.2-201ENST00000617367 129 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AC132068.1-201ENST00000623805 459 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 AC005294.1-201ENST00000355509 281 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 SNORA16A-201ENST00000384342 137 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AC117395.1-201ENST00000487390 403 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PRKDCP78527 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 MROH3P-201ENST00000435735 2676 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AL136531.3-201ENST00000624378 3658 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 OR2M1P-201ENST00000318104 951 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 RNA5SP319-201ENST00000362768 119 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 MIR23B-201ENST00000384832 97 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 RPS27AP7-201ENST00000422792 455 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 CHIAP3-201ENST00000423668 1133 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 CYCSP6-201ENST00000434498 302 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC4.19□□□□□ -1.74
PRKDCP78527 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 RNU4ATAC-201ENST00000580972 127 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 BNIP3P33-201ENST00000598912 569 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC010435.1-201ENST00000623353 1177 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 KCNMB3P1-202ENST00000493696 3389 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC132825.1-201ENST00000463573 2247 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 RNA5SP335-201ENST00000363817 110 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 MIR1193-201ENST00000408109 78 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 MORF4L1P5-201ENST00000433352 961 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AC073072.2-201ENST00000447425 348 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC4.19□□□□□ -1.74
PRKDCP78527 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKDCP78527 AL161637.1-201ENST00000622380 412 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 NEK2P4-201ENST00000425793 1329 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AL512310.3-201ENST00000547023 1335 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 MFSD8-218ENST00000641186 4448 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms