Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.59□□□□□ -1.19
RHBDL3P58872 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.59□□□□□ -1.19
RHBDL3P58872 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 AL121579.2-201ENST00000555466 590 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 CYCSP38-201ENST00000559840 322 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 MIR4433B-201ENST00000581329 102 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.59□□□□□ -1.19
RHBDL3P58872 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
RHBDL3P58872 AC022400.9-201ENST00000623633 273 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
RHBDL3P58872 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.59□□□□□ -1.2
RHBDL3P58872 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RHBDL3P58872 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RHBDL3P58872 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RHBDL3P58872 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RHBDL3P58872 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RHBDL3P58872 CASC19-238ENST00000641523 1558 ntBASIC7.59□□□□□ -1.2
RHBDL3P58872 AL354854.1-201ENST00000455940 1363 ntBASIC7.59□□□□□ -1.2
RHBDL3P58872 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.58□□□□□ -1.2
RHBDL3P58872 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.58□□□□□ -1.2
RHBDL3P58872 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RHBDL3P58872 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.58□□□□□ -1.2
RHBDL3P58872 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 AL136531.3-201ENST00000624378 3658 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 COX6B1P3-201ENST00000312310 260 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RHBDL3P58872 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.58□□□□□ -1.2
RHBDL3P58872 MIR7-1-201ENST00000384871 110 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 DHFRP5-201ENST00000406944 564 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 RN7SKP121-201ENST00000410842 305 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 CDY17P-201ENST00000414121 1282 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC009500.1-201ENST00000420684 583 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 CDY8P-201ENST00000428380 1279 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 MRPS21P3-201ENST00000436696 262 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 CDY20P-201ENST00000447528 1279 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC092824.1-201ENST00000483524 576 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 RN7SL714P-201ENST00000487050 298 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 RFPL4AP3-201ENST00000515267 345 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AP000662.1-201ENST00000530952 487 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AC005000.1-201ENST00000536192 288 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC008126.1-201ENST00000549019 480 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AL078623.1-201ENST00000602702 907 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AL353729.2-201ENST00000605859 1249 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 AC027575.3-201ENST00000583058 2747 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
RHBDL3P58872 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.58□□□□□ -1.2
RHBDL3P58872 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RHBDL3P58872 AC119674.1-202ENST00000641333 1860 ntBASIC7.58□□□□□ -1.2
RHBDL3P58872 LYARP1-201ENST00000436977 1501 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 AC005332.9-201ENST00000620266 2921 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms