Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN12P56749 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN12P56749 RN7SL70P-201ENST00000478322 302 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 AF305872.1-201ENST00000485217 471 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN12P56749 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN12P56749 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN12P56749 AC010409.2-201ENST00000505780 478 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 ENPP7P3-201ENST00000509123 241 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN12P56749 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN12P56749 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN12P56749 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN12P56749 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN12P56749 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN12P56749 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN12P56749 HMGN2P47-201ENST00000559378 272 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN12P56749 RN7SL131P-201ENST00000579043 256 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 MIR4258-201ENST00000580920 91 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 AP001357.1-201ENST00000586304 1053 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 RPL29P33-201ENST00000587474 316 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN12P56749 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN12P56749 AC024085.1-201ENST00000604299 432 ntBASIC5.34□□□□□ -1.55
CLDN12P56749 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN12P56749 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN12P56749 AC012078.1-201ENST00000405035 1646 ntBASIC5.34□□□□□ -1.56
CLDN12P56749 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 AL355834.1-201ENST00000556602 3965 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN12P56749 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 AL049869.1-201ENST00000556933 1402 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 AL161912.4-201ENST00000623889 2468 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AC093671.1-201ENST00000624981 2929 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 SNORA43.1-201ENST00000364863 140 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN12P56749 U3.23-201ENST00000391132 200 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 FDPSP5-201ENST00000399474 1057 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 RPL3P11-201ENST00000434028 1146 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN12P56749 GTF2IP14-201ENST00000441415 586 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 RPL5P10-201ENST00000445207 894 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN12P56749 RPS3AP49-201ENST00000472161 790 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 RN7SKP242-201ENST00000515967 289 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN12P56749 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN12P56749 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN12P56749 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN12P56749 RPS4XP21-201ENST00000603814 750 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AC114477.1-201ENST00000605097 605 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AL137000.1-201ENST00000610528 1244 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AC009283.1-201ENST00000615852 645 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN12P56749 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN12P56749 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 AL161756.3-201ENST00000641216 2071 ntBASIC5.33□□□□□ -1.56
CLDN12P56749 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLDN12P56749 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLDN12P56749 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN12P56749 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 AC024587.1-201ENST00000505925 2157 ntBASIC5.32□□□□□ -1.56
CLDN12P56749 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 AL359091.1-201ENST00000449048 1734 ntBASIC5.32□□□□□ -1.56
CLDN12P56749 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN12P56749 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN12P56749 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN12P56749 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLDN12P56749 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.32□□□□□ -1.56
CLDN12P56749 RN7SKP17-201ENST00000411242 351 ntBASIC5.32□□□□□ -1.56
CLDN12P56749 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN12P56749 AC239800.1-201ENST00000442049 719 ntBASIC5.32□□□□□ -1.56
CLDN12P56749 PCMTD1P3-201ENST00000451824 472 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms