Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 CYP2G2P-201ENST00000594920 1485 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.1□□□□□ -1.43
CLDN6P56747 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CLDN6P56747 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.1□□□□□ -1.43
CLDN6P56747 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 RNFT1P3-201ENST00000340898 1052 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 RNA5SP178-201ENST00000410380 128 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 RPS7P14-201ENST00000426405 583 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC011742.2-201ENST00000443818 352 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 RN7SL273P-201ENST00000481561 299 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC063943.2-201ENST00000495697 534 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC023818.1-201ENST00000498379 384 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 AC090022.1-201ENST00000546569 311 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 AC135626.1-201ENST00000556983 435 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC106785.4-201ENST00000569492 412 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 AC005332.4-201ENST00000592752 579 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC013244.1-201ENST00000604279 193 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC004477.3-201ENST00000614061 590 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AC010333.3-201ENST00000615100 402 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.1□□□□□ -1.43
CLDN6P56747 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CLDN6P56747 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 MAPK10-344ENST00000641718 3746 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 AL033543.1-201ENST00000623440 13454 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CLDN6P56747 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.1□□□□□ -1.43
CLDN6P56747 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CLDN6P56747 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 BRD7P6-201ENST00000431406 1860 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CLDN6P56747 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CLDN6P56747 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 OR52B3P-201ENST00000314715 928 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 RPL36P18-201ENST00000419316 318 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 BX323845.3-201ENST00000428215 527 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.09□□□□□ -1.43
CLDN6P56747 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CLDN6P56747 RN7SL717P-201ENST00000478343 297 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 RPL23AP68-201ENST00000480924 445 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 RN7SL629P-201ENST00000489622 285 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.09□□□□□ -1.43
CLDN6P56747 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 SNORA70D-201ENST00000578836 135 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.09□□□□□ -1.43
CLDN6P56747 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 AC091768.1-201ENST00000609258 930 ntBASIC6.09□□□□□ -1.43
CLDN6P56747 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.09□□□□□ -1.43
CLDN6P56747 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.09□□□□□ -1.43
CLDN6P56747 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLDN6P56747 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms