Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 METTL15-211ENST00000634762 718 ntTSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC10.72□□□□□ -0.69
SMARCA4P51532 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SMARCA4P51532 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.71□□□□□ -0.69
SMARCA4P51532 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA4P51532 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA4P51532 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA4P51532 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMARCA4P51532 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC10.71□□□□□ -0.69
SMARCA4P51532 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC10.71□□□□□ -0.69
SMARCA4P51532 OR5W1P-201ENST00000423705 938 ntBASIC10.71□□□□□ -0.69
SMARCA4P51532 RANP1-206ENST00000455094 651 ntBASIC10.71□□□□□ -0.69
SMARCA4P51532 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
SMARCA4P51532 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC10.71□□□□□ -0.69
SMARCA4P51532 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.71□□□□□ -0.69
SMARCA4P51532 CTNNA1P1-201ENST00000515849 2728 ntBASIC10.71□□□□□ -0.7
SMARCA4P51532 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.71□□□□□ -0.7
SMARCA4P51532 PARP4P2-201ENST00000446672 3326 ntBASIC10.71□□□□□ -0.7
SMARCA4P51532 AL731556.1-201ENST00000394628 3711 ntBASIC10.71□□□□□ -0.7
SMARCA4P51532 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA4P51532 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA4P51532 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC10.71□□□□□ -0.7
SMARCA4P51532 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC10.71□□□□□ -0.7
SMARCA4P51532 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA4P51532 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA4P51532 AC013488.1-201ENST00000526618 1838 ntBASIC10.71□□□□□ -0.7
SMARCA4P51532 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMARCA4P51532 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 CAV1-204ENST00000393470 598 ntTSL 4 BASIC10.7□□□□□ -0.7
SMARCA4P51532 AC136624.1-201ENST00000400791 413 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 RPS4XP5-201ENST00000419038 768 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC10.7□□□□□ -0.7
SMARCA4P51532 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.7□□□□□ -0.7
SMARCA4P51532 AC100832.1-201ENST00000471945 383 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 OARD1-211ENST00000480585 829 ntTSL 3 BASIC10.7□□□□□ -0.7
SMARCA4P51532 NDUFB5P1-201ENST00000508134 564 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC10.7□□□□□ -0.7
SMARCA4P51532 AL021368.3-201ENST00000607119 578 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 AL512329.2-201ENST00000607350 548 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC10.7□□□□□ -0.7
SMARCA4P51532 AL359513.1-201ENST00000614364 557 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
SMARCA4P51532 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 AC007842.1-201ENST00000597336 2039 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMARCA4P51532 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SMARCA4P51532 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
SMARCA4P51532 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC10.7□□□□□ -0.7
SMARCA4P51532 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SMARCA4P51532 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.7□□□□□ -0.7
SMARCA4P51532 FO082842.1-201ENST00000423552 1370 ntBASIC10.7□□□□□ -0.7
SMARCA4P51532 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 RN7SKP166-201ENST00000410812 305 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC10.69□□□□□ -0.7
SMARCA4P51532 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC10.69□□□□□ -0.7
SMARCA4P51532 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC10.69□□□□□ -0.7
SMARCA4P51532 RPS12P17-201ENST00000438591 377 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 AL355032.1-201ENST00000472981 438 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 RPS23P1-201ENST00000491662 432 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 SUMO2P7-201ENST00000511179 285 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 AC092593.2-201ENST00000513866 913 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.69□□□□□ -0.7
SMARCA4P51532 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC10.69□□□□□ -0.7
SMARCA4P51532 AL139407.1-201ENST00000613826 1175 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC10.69□□□□□ -0.7
SMARCA4P51532 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC10.69□□□□□ -0.7
SMARCA4P51532 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SMARCA4P51532 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC10.69□□□□□ -0.7
SMARCA4P51532 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 FO393409.1-201ENST00000399325 1372 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 RNA5SP507-201ENST00000363603 121 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA4P51532 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC10.69□□□□□ -0.7
SMARCA4P51532 AC253576.1-201ENST00000511645 1156 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC10.69□□□□□ -0.7
SMARCA4P51532 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC10.69□□□□□ -0.7
SMARCA4P51532 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC10.69□□□□□ -0.7
SMARCA4P51532 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.69□□□□□ -0.7
SMARCA4P51532 AC005840.5-201ENST00000619166 599 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 AC136428.4-201ENST00000634254 1155 ntBASIC10.69□□□□□ -0.7
SMARCA4P51532 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SMARCA4P51532 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SMARCA4P51532 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC10.69□□□□□ -0.7
SMARCA4P51532 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms