Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC036111.2-201ENST00000533247 901 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC009779.8-202ENST00000607990 932 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AL137246.2-201ENST00000613439 662 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AL137067.2-201ENST00000621202 131 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AL683826.1-201ENST00000624104 627 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC116667.2-201ENST00000641075 823 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.09□□□□□ -1.59
CCL3L1P16619 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.09□□□□□ -1.6
CCL3L1P16619 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCL3L1P16619 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCL3L1P16619 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCL3L1P16619 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CCL3L1P16619 AC027575.3-201ENST00000583058 2747 ntBASIC5.09□□□□□ -1.6
CCL3L1P16619 USP9YP3-201ENST00000434481 1766 ntBASIC5.09□□□□□ -1.6
CCL3L1P16619 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCL3L1P16619 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CCL3L1P16619 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AL353763.1-201ENST00000624467 1628 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCL3L1P16619 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 RNA5SP110-201ENST00000362638 115 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 RNA5SP375-201ENST00000362975 119 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 GCNT1P4-201ENST00000404096 329 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 TMA16P2-201ENST00000413187 601 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC021269.1-201ENST00000526860 705 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 OR4A40P-201ENST00000533878 948 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 MIR4502-201ENST00000580432 81 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.08□□□□□ -1.6
CCL3L1P16619 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 GLYATL1P2-202ENST00000588046 902 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 AC020916.2-201ENST00000591242 360 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC008555.7-201ENST00000605008 583 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 AL080312.2-201ENST00000613001 630 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 MIR6806-201ENST00000622141 64 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC5.08□□□□□ -1.6
CCL3L1P16619 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCL3L1P16619 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCL3L1P16619 AC092692.1-201ENST00000623625 2595 ntBASIC5.08□□□□□ -1.6
CCL3L1P16619 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCL3L1P16619 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.07□□□□□ -1.6
CCL3L1P16619 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCL3L1P16619 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCL3L1P16619 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCL3L1P16619 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCL3L1P16619 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCL3L1P16619 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms